Literature DB >> 30017910

Practical identifiability and uncertainty quantification of a pulsatile cardiovascular model.

Andrew D Marquis1, Andrea Arnold2, Caron Dean-Bernhoft3, Brian E Carlson4, Mette S Olufsen5.   

Abstract

Mathematical models are essential tools to study how the cardiovascular system maintains homeostasis. The utility of such models is limited by the accuracy of their predictions, which can be determined by uncertainty quantification (UQ). A challenge associated with the use of UQ is that many published methods assume that the underlying model is identifiable (e.g. that a one-to-one mapping exists from the parameter space to the model output). In this study we present a novel workflow to calibrate a lumped-parameter model to left ventricular pressure and volume time series data. Key steps include using (1) literature and available data to determine nominal parameter values; (2) sensitivity analysis and subset selection to determine a set of identifiable parameters; (3) optimization to find a point estimate for identifiable parameters; and (4) frequentist and Bayesian UQ calculations to assess the predictive capability of the model. Our results show that it is possible to determine 5 identifiable model parameters that can be estimated to our experimental data from three rats, and that computed UQ intervals capture the measurement and model error.
Copyright © 2018. Published by Elsevier Inc.

Entities:  

Keywords:  Cardiovascular dynamics; Modeling; Parameter estimation; Patient-specific modeling; Uncertainty quantification

Mesh:

Year:  2018        PMID: 30017910     DOI: 10.1016/j.mbs.2018.07.001

Source DB:  PubMed          Journal:  Math Biosci        ISSN: 0025-5564            Impact factor:   2.144


  7 in total

1.  Uncertainty quantification of simulated biomechanical stimuli in coronary artery bypass grafts.

Authors:  Justin S Tran; Daniele E Schiavazzi; Andrew M Kahn; Alison L Marsden
Journal:  Comput Methods Appl Mech Eng       Date:  2018-11-15       Impact factor: 6.756

2.  Postural orthostatic tachycardia syndrome explained using a baroreflex response model.

Authors:  Justen R Geddes; Johnny T Ottesen; Jesper Mehlsen; Mette S Olufsen
Journal:  J R Soc Interface       Date:  2022-08-24       Impact factor: 4.293

3.  Multilevel and multifidelity uncertainty quantification for cardiovascular hemodynamics.

Authors:  Casey M Fleeter; Gianluca Geraci; Daniele E Schiavazzi; Andrew M Kahn; Alison L Marsden
Journal:  Comput Methods Appl Mech Eng       Date:  2020-04-21       Impact factor: 6.756

4.  Cardiovascular regulation in response to multiple hemorrhages: analysis and parameter estimation.

Authors:  Maria-Veronica Ciocanel; Steffen S Docken; Rebecca E Gasper; Caron Dean; Brian E Carlson; Mette S Olufsen
Journal:  Biol Cybern       Date:  2018-09-12       Impact factor: 2.086

5.  Global sensitivity analysis informed model reduction and selection applied to a Valsalva maneuver model.

Authors:  E Benjamin Randall; Nicholas Z Randolph; Alen Alexanderian; Mette S Olufsen
Journal:  J Theor Biol       Date:  2021-05-11       Impact factor: 2.405

6.  Practical Use of Regularization in Individualizing a Mathematical Model of Cardiovascular Hemodynamics Using Scarce Data.

Authors:  Ali Tivay; Xin Jin; Alex Kai-Yuan Lo; Christopher G Scully; Jin-Oh Hahn
Journal:  Front Physiol       Date:  2020-05-26       Impact factor: 4.566

7.  An in-silico analysis of experimental designs to study ventricular function: A focus on the right ventricle.

Authors:  Mitchel J Colebank; Naomi C Chesler
Journal:  PLoS Comput Biol       Date:  2022-09-20       Impact factor: 4.779

  7 in total

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