| Literature DB >> 30013987 |
Fengming Yang1,2, Zhiqiang Qin3, Chuchu Shao2, Weitao Liu4, Ling Ma1, Yongqian Shu1,2, Hua Shen1,2.
Abstract
BACKGROUND ANDEntities:
Mesh:
Substances:
Year: 2018 PMID: 30013987 PMCID: PMC6022322 DOI: 10.1155/2018/9271215
Source DB: PubMed Journal: Biomed Res Int Impact factor: 3.411
Figure 1The flowchart of literature search and selection procedure.
Baseline characteristics of studies associated with the risk of lung cancer included in the meta-analysis.
| Year | Surname | Ethnicity | Country | SOC | Genotyping | Cases | Controls | Gene polymorphism |
|---|---|---|---|---|---|---|---|---|
| 2017 | Yamamoto | Japan | Asian | HB | TaqMan | 462 | 379 | -460C/T |
| 2017 | Naikoo | India | Asian | PB | PCR-RFLP | 112 | 116 | +936C/T |
| 2017 | Naykoo | India | Asian | PB | PCR-RFLP | 199 | 401 | +936C/T, -2578C/A |
| 2015 | Krupnova | Belarus | Caucasian | HB | PCR-RFLP | 202 | 336 | +936C/T, -2578C/A |
| 2015 | Liu | China | Asian | PB | PCR-RFLP | 414 | 338 | -460C/T, -2578C/A |
| 2014 | Deng | China | Asian | HB | PCR-RFLP | 65 | 110 | -2578C/A |
| 2013 | Sun | China | Asian | PB | PCR-RFLP | 126 | 160 | -460C/T |
| 2013 | de Mello | Portugal | Caucasian | HB | MassARRAY | 144 | 144 | +936C/T, -460C/T, -2578C/A |
| 2012 | Naik | India | Asian | PB | PCR-RFLP | 100 | 150 | +936C/T |
| 2012 | Li | China | Asian | PB | PCR-RFLP | 150 | 150 | +936C/T, -2578C/A |
| 2009 | Liang | China | Asian | PB | PCR-RFLP | 171 | 172 | +936C/T, -2578C/A |
| 2008 | Zhai | America | Caucasian | HB | TaqMan | 1900 | 1458 | +936C/T, -460C/T |
| 2005 | Lee | Korea | Asian | PB | PCR-RFLP | 432 | 432 | +936C/T, -460C/T |
SOC: source of control; HB: hospital-based; PB: population-based controls.
The genotype frequency data of individual studies included in the meta-analysis.
| VEGF | rs3025039 | +936C/T | Case (n) | Control (n) | ||||||
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| Year | Surname | Case | Control | CC | CT | TT | CC | CT | TT | HWE |
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| 2017 | Naikoo | 109 | 112 | 68 | 32 | 9 | 65 | 38 | 9 | Y |
| 2017 | Naykoo | 199 | 401 | 80 | 99 | 20 | 261 | 120 | 20 | Y |
| 2015 | Krupnova | 161 | 360 | 115 | 38 | 8 | 267 | 80 | 13 | N |
| 2013 | de Mello | 144 | 144 | 115 | 28 | 1 | 111 | 30 | 3 | Y |
| 2012 | Naik | 90 | 150 | 54 | 28 | 8 | 80 | 48 | 22 | N |
| 2012 | Li | 150 | 150 | 108 | 35 | 7 | 114 | 33 | 3 | Y |
| 2009 | Liang | 171 | 172 | 123 | 40 | 8 | 131 | 38 | 3 | Y |
| 2008 | Zhai | 1900 | 1458 | 1441 | 424 | 35 | 1125 | 308 | 25 | Y |
| 2005 | Lee | 432 | 432 | 281 | 137 | 14 | 266 | 154 | 12 | Y |
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| VEGF | rs833061 | -460C/T | ||||||||
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| 2017 | Yamamoto | 462 | 379 | 32 | 197 | 233 | 35 | 157 | 187 | Y |
| 2015 | Liu | 414 | 338 | 21 | 164 | 229 | 23 | 138 | 177 | Y |
| 2013 | Sun | 126 | 160 | 22 | 43 | 61 | 38 | 69 | 53 | Y |
| 2013 | de Mello | 144 | 144 | 28 | 79 | 37 | 31 | 72 | 41 | Y |
| 2008 | Zhai | 1900 | 1458 | 439 | 922 | 539 | 342 | 694 | 422 | Y |
| 2005 | Lee | 430 | 432 | 18 | 184 | 228 | 27 | 168 | 237 | Y |
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| VEGF | rs699947 | -2578C/A | ||||||||
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| 2017 | Naykoo | 199 | 401 | 24 | 170 | 5 | 200 | 145 | 56 | N |
| 2015 | Krupnova | 162 | 360 | 41 | 90 | 31 | 83 | 186 | 91 | Y |
| 2015 | Liu | 414 | 338 | 230 | 164 | 20 | 177 | 138 | 23 | Y |
| 2014 | Deng | 65 | 110 | 26 | 33 | 6 | 62 | 41 | 7 | Y |
| 2013 | de Mello | 144 | 144 | 43 | 75 | 26 | 44 | 73 | 27 | Y |
| 2012 | Li | 150 | 150 | 93 | 45 | 12 | 98 | 49 | 3 | Y |
| 2009 | Liang | 171 | 172 | 129 | 28 | 14 | 112 | 56 | 4 | Y |
Meta-analysis results for the included studies of the association between rs3025039, rs833061, and rs699947 polymorphisms and risk of lung cancer.
| Variables | No. of studies | Dominant model | Recessive model | Homozygous model | Heterozygous model | Allele model | ||||||||||
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| OR (95% CI) | P values | I-squared (%) | OR (95% CI) | P values | I-squared (%) | OR (95% CI) | P values | I-squared (%) | OR (95% CI) | P values | I-squared (%) | OR (95% CI) | P values | I-squared (%) | ||
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| rs3025039 C>T | +936C/T | (CT + TT) vs. CC | TT vs. (CT + CC) | TT vs. CC | CT vs. CC | T vs. C | ||||||||||
| All | 9 | 1.12 (0.87-1.46) | <0.001 | 76.4 | 1.25 (0.94-1.65) | 0.266 | 19.9 | 1.32(0.86-2.04) | 0.047 | 48.9 | 1.11 (0.86-1.42) | <0.001 | 72.1 | 1.11 (0.89-1.38) | <0.001 | 76.2 |
| Ethnicity | ||||||||||||||||
| Asian | 6 | 1.17 (0.75-1.81) | <0.001 | 84.4 | 1.37 (0.95-1.97) | 0.154 | 37.9 | 1.47 (0.78-2.77) | 0.022 | 61.9 | 1.14 (0.74-1.75) | <0.001 | 82 | 1.15(0.81-1.65) | <0.001 | 83.8 |
| Caucasian | 3 | 1.07 (0.92-1.23) | 0.681 | 0 | 1.10 (0.70-1.70) | 0.507 | 0 | 1.11 (0.71-1.73) | 0.488 | 0 | 1.07 (0.92-1.24) | 0.836 | 0 | 1.06 (0.93-1.21) | 0.522 | 0 |
| Source of control | ||||||||||||||||
| HB | 3 | 1.07 (0.92-1.23) | 0.681 | 0 | 1.10 (0.70-1.70) | 0.507 | 0 | 1.11 (0.71-1.73) | 0.488 | 0 | 1.07(0.92-1.24) | 0.836 | 0 | 1.06 (0.93-1.21) | 0.522 | 0 |
| PB | 6 | 1.17 (0.75-1.81) | <0.001 | 84.4 | 1.37 (0.95-1.97) | 0.154 | 37.9 | 1.47 (0.78-2.77) | 0.022 | 61.9 | 1.14 (0.74-1.75) | <0.001 | 82 | 1.15(0.81-1.65) | <0.001 | 83.8 |
| rs833061 C>T | -460C/T | (CT + TT) vs. CC | TT vs. (CT + CC) | TT vs. CC | CT vs. CC | T vs. C | ||||||||||
| All | 6 | 1.11(0.97-1.27) | 0.534 | 0 | 1.02(0.92-1.13) | 0.151 | 38.2 | 1.12 (0.96-1.30) | 0.269 | 21.9 | 1.11 (0.96-1.28) | 0.687 | 0 | 1.04 (0.97-1.12) | 0.201 | 31.2 |
| Ethnicity | ||||||||||||||||
| Asian | 4 | 1.42 (1.07-1.90) | 0.991 | 0 | 1.09 (0.94-1.27) | 0.085 | 54.6 |
| 0.821 | 0 | 1.34 (0.99-1.81) | 0.837 | 0 |
| 0.184 | 38 |
| Caucasian | 2 | 1.03 (0.88-1.20) | 0.721 | 0 | 0.96 (0.83-1.11) | 0.684 | 0 | 1.00 (0.83-1.20) | 0.991 | 0 | 1.05 (0.89-1.24) | 0.616 | 0 | 0.99 (0.91-1.09) | 0.957 | 0 |
| Source of control | ||||||||||||||||
| HB | 3 | 1.05 (0.91-1.22) | 0.531 | 0 | 0.98 (0.86-1.11) | 0.807 | 0 | 1.03 (0.87-1.23) | 0.532 | 0 | 1.07 (0.92-1.26) | 0.554 | 0 | 1.01 (0.93-1.10) | 0.757 | 0 |
| PB | 3 |
| 0.968 | 0 | 1.11 (0.93-1.33) | 0.039 | 69.1 |
| 0.708 | 0 | 1.33 (0.92-1.91) | 0.656 | 0 | 1.14 (0.99-1.31) | 0.095 | 57.5 |
| rsrs699947 C>A | -2578C/A | (CA + AA) vs. CC | AA vs. (AA + CC) | AA vs. CC | AA vs. CC | A vs. C | ||||||||||
| All | 7 | 1.33(0.74-2.40) | <0.001 | 91.8 | 0.98(0.52-1.84) | <0.001 | 78 | 1.15(0.71-1.86) | 0.037 | 55.1 | 1.33 (0.66-2.68) | <0.001 | 93.7 | 1.12 (0.87-1.43) | <0.001 | 77.2 |
| Ethnicity | ||||||||||||||||
| Asian | 5 | 1.53 (0.67-3.51) | <0.001 | 94.3 | 1.15(0.37-3.52) | <0.001 | 84.9 | 1.50(0.71-3.20) | 0.026 | 63.9 | 1.48(0.54-4.04) | <0.001 | 95.7 | 1.22 (0.87-1.70) | <0.001 | 80.6 |
| Caucasian | 2 | 0.94(0.68-1.31) | 0.654 | 0 | 0.79(0.55-1.13) | 0.417 | 0 | 0.79 (0.52-1.22) | 0.426 | 0 | 1.01(0.72-1.42) | 0.842 | 0 | 0.90 (0.74-1.11) | 0.434 | 0 |
| Source of control | ||||||||||||||||
| HB | 3 | 1.15 (0.75-1.77) | 0.122 | 52.6 | 0.83 (0.59-1.18) | 0.411 | 0 | 0.93 (0.56-1.54) | 0.247 | 28.6 | 1.19(0.82-1.73) | 0.224 | 33.2 | 1.05 (0.76-1.45) | 0.073 | 61.8 |
| PB | 4 | 1.45(0.54-3.90) | <0.001 | 95.6 | 1.09 (0.27-4.34) | <0.001 | 88.2 | 1.43 (0.58-3.54) | 0.017 | 70.4 | 1.39 (0.42-4.65) | <0.001 | 96.7 | 1.15 (0.79-1.69) | <0.001 | 84.3 |
Figure 2Forest plot of the association between the +936C/T polymorphism and lung cancer risk. (a) Allele model; (b) homozygote model; (c) heterozygote model; (d) dominant model; (e) recessive model.
Figure 3Forest plot of the association between the -460C/T polymorphism and lung cancer risk. (a) Allele model; (b) homozygote model; (c) heterozygote model; (d) dominant model; (e) recessive model.
Figure 4Forest plot of the association between the -2578C/A polymorphism and lung cancer risk. (a) Allele model; (b) homozygote model; (c) heterozygote model; (d) dominant model; (e) recessive model.
Figure 5Sensitivity analysis in the homozygote model. (a) +936C/T polymorphism; (b) -460C/T polymorphism; (c) -2578C/A polymorphism.
Figure 6Begg's funnel plot of publication bias test in the homozygote model. (a) +936C/T polymorphism; (b) -460C/T polymorphism; (c) -2578C/A polymorphism.