Literature DB >> 30013214

Dissipative adaptation in driven self-assembly leading to self-dividing fibrils.

Esra Te Brinke1, Joost Groen1, Andreas Herrmann2,3, Hans A Heus1, Germán Rivas4, Evan Spruijt5, Wilhelm T S Huck6.   

Abstract

Out-of-equilibrium self-assembly of proteins such as actin and tubulin is a key regulatory process controlling cell shape, motion and division. The design of functional nanosystems based on dissipative self-assembly has proven to be remarkably difficult due to a complete lack of control over the spatial and temporal characteristics of the assembly process. Here, we show the dissipative self-assembly of FtsZ protein (a bacterial homologue of tubulin) within coacervate droplets. More specifically, we show how such barrier-free compartments govern the local availability of the energy-rich building block guanosine triphosphate, yielding highly dynamic fibrils. The increased flux of FtsZ monomers at the tips of the fibrils results in localized FtsZ assembly, elongation of the coacervate compartments, followed by division of the fibrils into two. We rationalize the directional growth and division of the fibrils using dissipative reaction-diffusion kinetics and capillary action of the filaments as main inputs. The principle presented here, in which open compartments are used to modulate the rates of dissipative self-assembly by restricting the absorption of energy from the environment, may provide a general route to dissipatively adapting nanosystems exhibiting life-like behaviour.

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Year:  2018        PMID: 30013214     DOI: 10.1038/s41565-018-0192-1

Source DB:  PubMed          Journal:  Nat Nanotechnol        ISSN: 1748-3387            Impact factor:   39.213


  29 in total

1.  Artificial Signal Feedback Network Mimicking Cellular Adaptivity.

Authors:  Hui Liu; Qiuxia Yang; Ruizi Peng; Hailan Kuai; Yifan Lyu; Xiaoshu Pan; Qiaoling Liu; Weihong Tan
Journal:  J Am Chem Soc       Date:  2019-04-16       Impact factor: 15.419

2.  Programmable and Chemically Fueled DNA Coacervates by Transient Liquid-Liquid Phase Separation.

Authors:  Jie Deng; Andreas Walther
Journal:  Chem       Date:  2020-10-21       Impact factor: 22.804

3.  Spontaneous chiral symmetry breaking in a random driven chemical system.

Authors:  William D Piñeros; Tsvi Tlusty
Journal:  Nat Commun       Date:  2022-04-26       Impact factor: 17.694

4.  Dissipative biocatalytic cascades and gated transient biocatalytic cascades driven by nucleic acid networks.

Authors:  Yu Ouyang; Pu Zhang; Itamar Willner
Journal:  Sci Adv       Date:  2022-05-06       Impact factor: 14.957

5.  In vitro reconstitution of the bacterial cytoskeleton: expected and unexpected new insights.

Authors:  Beatrice Ramm; Petra Schwille
Journal:  Microb Biotechnol       Date:  2018-11-08       Impact factor: 5.813

6.  Formation of Neutral Peptide Aggregates as Studied by Mass-Selective IR Action Spectroscopy.

Authors:  Sjors Bakels; Sebastiaan B A Porskamp; Anouk M Rijs
Journal:  Angew Chem Int Ed Engl       Date:  2019-06-28       Impact factor: 15.336

7.  Programmable dynamic steady states in ATP-driven nonequilibrium DNA systems.

Authors:  Laura Heinen; Andreas Walther
Journal:  Sci Adv       Date:  2019-07-19       Impact factor: 14.136

8.  A chemically fueled non-enzymatic bistable network.

Authors:  Indrajit Maity; Nathaniel Wagner; Rakesh Mukherjee; Dharm Dev; Enrique Peacock-Lopez; Rivka Cohen-Luria; Gonen Ashkenasy
Journal:  Nat Commun       Date:  2019-10-11       Impact factor: 14.919

9.  Nonspherical Coacervate Shapes in an Enzyme-Driven Active System.

Authors:  Willem Kasper Spoelstra; Eli O van der Sluis; Marileen Dogterom; Louis Reese
Journal:  Langmuir       Date:  2020-02-17       Impact factor: 3.882

Review 10.  ATP-Mediated Transient Behavior of Stomatocyte Nanosystems.

Authors:  Hailong Che; Jianzhi Zhu; Shidong Song; Alexander F Mason; Shoupeng Cao; Imke A B Pijpers; Loai K E A Abdelmohsen; Jan C M van Hest
Journal:  Angew Chem Int Ed Engl       Date:  2019-07-25       Impact factor: 15.336

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