| Literature DB >> 30011860 |
Rashid Mir1, Musadiq Bhat2, Jamsheed Javid3, Chandan Jha4, Alpana Saxena5, Shaheen Banu6.
Abstract
Purpose: Catechol-O-methyltransferase (COMT) plays a central role in DNA repair and estrogen-induced carcinogenesis. The nonsynonymous single nucleotide polymorphism (SNP) in exon 4 G > A or Val108 > 158Met or rs4680 G > A influences COMT enzyme activity. The three phenotypes of the COMT enzyme activities include COMT A/A with low enzyme activity, COMT A/G with medium enzyme activity and COMT G/G with high enzyme activity. The Met allele is associated with low enzymatic activity resulting in higher levels of prefrontal dopamine. Conversely, the Val allele is associated with high enzymatic activity and lower levels of prefrontal dopamine. The Met allele has been associated with several psychiatric disorders such as panic disorder. Many recent epidemiologic studies have investigated the association between the COMT Val158Met polymorphism and coronary artery diseases risk, but the results are inconclusive. Therefore our study was aimed to explore the association between COMT Val158Met polymorphism and the risk of coronary artery disease in India. Methology: This study was conducted on 100 clinically confirmed cases of coronary artery diseases and 100 healthy controls. COMT Val158Met genotyping was performed by allele-specific polymerase chain reaction (AS-PCR).Entities:
Keywords: A; COMT G > COMT Val158Met; allele specific PCR-AS-PCR; catechol-O-methyltransferase (COMT); coronary artery disease (CAD)
Year: 2018 PMID: 30011860 PMCID: PMC6162781 DOI: 10.3390/jcdd5030038
Source DB: PubMed Journal: J Cardiovasc Dev Dis ISSN: 2308-3425
Catechol-O-methyltransferase COMT enzyme and its three phenotypes activities (COMT-475G > A or rs4680 G > A or Met158Val gene polymorphism).
| Homozygous COMT G/G | Homozygous Val158val | Enzyme with high activity | Low level of dopamine |
| Heterozygous COMT A/G | Heterozygous Val158Met | Enzyme with medium activity | Medium level of dopamine |
| Homozygous COMT A/A | Homozygous Met158met | Enzyme with low activity | High level of dopamine |
Allele-specific polymerase chain reaction (AS-PCR) primers for COMT (Val158Met) genotyping.
| Primer Direction | Nucleotide Change | Amino Acid Change | Primer Sequence | Annealing Tempt | Product Size |
|---|---|---|---|---|---|
| Forward F | 5′-ACTGTGGCTACTCAGCTGTG-3′ | 56 °C | 169 bp | ||
| Reverse R1 | G allele | (Val158) | 5′-GCATGCACACCTTGTCCTT-3′ | ||
| Reverse R2 | A allele | (Met158) | 5′-GCATGCACCACCTTGTCCTTCAT-3′ |
Figure 1Allele-specific polymerase chain reaction (PCR) for the detection of catechol-O-methyltransferase (COMT) (Vall58Met) G > A gene polymorphism.
Clinicopathological characteristics of coronary artery disease (CAD) patients and controls.
| Variable | No. of CAD Cases | Healthy Controls |
|---|---|---|
| Subjects | 100 100% | 100 100% |
| Men | 96 96% | 90 90% |
| Women | 4 4% | 10 10% |
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| Age ≤ 50 | 47 47% | 60 60% |
| Age > 50 | 53 53% | 40 40% |
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| ≤140 mg | 55 | 57% |
| >140 mg | 45 | 43% |
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| ≤200 mg | 93 | 93% |
| >200 mg | 7 | 7% |
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| ≤40 mg | 91 | 91% |
| >40 mg | 9 | 9% |
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| ≤100 mg | 79 | 79% |
| >100 mg | 21 | 21% |
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| ≤150 mg | 51 | 51% |
| >150 mg | 49 | 49% |
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| Yes | 14 | 14% |
| No | 86 | 86% |
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| Yes | 23 | 23% |
| No | 77 | 77% |
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| Yes | 63 | 63% |
| No | 37 | 37% |
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| Yes | 40 | 40% |
| No | 60 | 60% |
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| Yes | 2 | 2% |
| No | 98 | 98% |
Genotype and allele frequency of COMT polymorphism in coronary artery disease (CAD) patients and controls.
| Subjects | Number | G/G (Val/Val) | A/G (Val/Met) | A/A (Met/Met) | X2 | df | G | A | |
|---|---|---|---|---|---|---|---|---|---|
|
| 100 | 10 (10%) | 70 (70%) | 20 (20%) | 14.1 | 2 | 0.45 | 0.55 | <0.008 |
|
| 100 | 30 (30%) | 60 (60%) | 10 (10%) | 0.60 | 0.40 |
Clinical correlation of COMT polymorphism with respect to clinicopathological characteristics of CAD patients and controls.
| Allele/Genotype | Number | G/G (Val/Val) | A/G (Val/Met) | A/A (Met/Met) | |
|---|---|---|---|---|---|
|
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| Men | 96 | 09 | 68 | 19 | 0.53 |
| Women | 4 | 01 | 02 | 01 | |
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| ≤50 years | 47 | 03 | 27 | 17 | 0.0480 |
| >50 years | 53 | 07 | 43 | 03 | |
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| ≤140 mg |
| 03 | 45 | 7 | 0.016 |
| >140 mg |
| 07 | 25 | 13 | |
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| ≤200 mg | 93 | 09 | 69 | 15 | NS |
| >200 mg | 07 | 01 | 01 | 05 | |
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| ≤40 mg | 91 | 08 | 65 | 18 | NS |
| >40 mg | 9 | 02 | 05 | 02 | |
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| ≤100 mg | 79 | 07 | 58 | 14 | NS |
| >100 mg | 21 | 03 | 12 | 06 | |
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| ≤150 mg | 51 | 08 | 40 | 03 | <0.006 |
| >150 mg | 49 | 02 | 30 | 17 | |
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| Hypertension | 14 | 02 | 08 | 04 | NS |
| No hypertension | 86 | 08 | 62 | 16 | |
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| Diabetes | 23 | 04 | 13 | 06 | 0.023 |
| No Diabetes | 77 | 06 | 57 | 14 | |
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| Smoking | 63 | 05 | 45 | 13 | <0.667 |
| No Smoking | 37 | 05 | 25 | 07 | |
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| Alcohol | 40 | 04 | 24 | 16 | <0.001 |
| No Alcohol | 60 | 06 | 46 | 04 | |
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| Pan Masala | 02 | 1 | 1 | 0 | <0.206 |
| No Pan Masala | 98 | 09 | 69 | 20 | |
Association of COMT rs4680 G/A gene variation with coronary artery disease.
| Genotype | Healthy Controls | CAD Patients | OR (95% CI) | Risk Ratio (RR) | |||
|---|---|---|---|---|---|---|---|
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| COMT-GG | 30 | 30% | 10 | 10% | 1 (ref.) | 1 (ref.) | |
| COMT-GA | 60 | 60% | 70 | 70% | 3.5 (1.58–7.74) | 1.62 (1.25–2.10) | 0.002 |
| COMT-AA | 10 | 10% | 20 | 20% | 6.0 (2.11–17.03) | 2.25 (1.31–3.8) | <0.003 |
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| COMT-GG | 30 | 30% | 10 | 10% | 1 (ref.) | 1 (ref.) | |
| COMT-( | 70 | 70% | 90 | 90% | 3.85 (1.76–8.4) | 1.71 (1.33–2.20) | <0.0007 |
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| COMT-( | 90 | 90% | 80 | 81.63% | 1 (ref.) | 1 (ref.) | |
| COMT-AA | 10 | 10% | 18 | 18.36% | 2.02 (0.86–4.7) | 1.05 (0.74–1.51) | 0.72 |
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| COMT-G | 120 | 60% | 90 | 45.45% | 1 (ref.) | 1 (ref.) | |
| COMT- | 80 | 40% | 108 | 54.55% | 1.8 (1.20–2.67) | 1.34 (1.09–1.64) | <0.004 |