| Literature DB >> 30011394 |
Bruna Letícia Domingues Molinari1,2, Alice Fernandes Alfieri1,3, Amauri Alcindo Alfieri1,3.
Abstract
Rotaviruses (RVs), a common cause of viral gastroenteritis in humans and animals, are classified into 9 established groups/species (RVA-RVI). Although RVB has been found in several countries, genetic variation among RVB field strains remains poorly characterized. RVB strains can be classified into G genotypes based on a nucleotide (nt) homology that exceeds a cutoff value of 80% for the gene that encodes the structural protein VP7. In this study, we determined the VP7 nt and deduced amino acid sequences of one RVB strain (RB62) identified in a diarrheic fecal sample obtained from a piglet in Brazil in 2012. Comparative analysis of this strain and the strains of the other 21 previously identified VP7 ge-notypes showed that the highest nt identity (71.2%) was found with the porcine PB-70-H5 strain within the G4 genotype. However, when compared with the nonclassified Vietnamese RVB G genotype 14177_18 strain, the nt sequence identity was of 82.9%. These results led us to conclude that the Brazilian strain BR62 and the Vietnamese strain 14177_18 belong to a novel G genotype (G22).Entities:
Keywords: Diarrhea outbreak; Novel G genotype; Pigs; Reverse transcription PCR; Rotavirus group B
Mesh:
Year: 2018 PMID: 30011394 DOI: 10.1159/000490388
Source DB: PubMed Journal: Intervirology ISSN: 0300-5526 Impact factor: 1.763