Literature DB >> 30011394

Molecular Characterization of a New G (VP7) Genotype in Group B Porcine Rotavirus.

Bruna Letícia Domingues Molinari1,2, Alice Fernandes Alfieri1,3, Amauri Alcindo Alfieri1,3.   

Abstract

Rotaviruses (RVs), a common cause of viral gastroenteritis in humans and animals, are classified into 9 established groups/species (RVA-RVI). Although RVB has been found in several countries, genetic variation among RVB field strains remains poorly characterized. RVB strains can be classified into G genotypes based on a nucleotide (nt) homology that exceeds a cutoff value of 80% for the gene that encodes the structural protein VP7. In this study, we determined the VP7 nt and deduced amino acid sequences of one RVB strain (RB62) identified in a diarrheic fecal sample obtained from a piglet in Brazil in 2012. Comparative analysis of this strain and the strains of the other 21 previously identified VP7 ge-notypes showed that the highest nt identity (71.2%) was found with the porcine PB-70-H5 strain within the G4 genotype. However, when compared with the nonclassified Vietnamese RVB G genotype 14177_18 strain, the nt sequence identity was of 82.9%. These results led us to conclude that the Brazilian strain BR62 and the Vietnamese strain 14177_18 belong to a novel G genotype (G22).
© 2018 S. Karger AG, Basel.

Entities:  

Keywords:  Diarrhea outbreak; Novel G genotype; Pigs; Reverse transcription PCR; Rotavirus group B

Mesh:

Year:  2018        PMID: 30011394     DOI: 10.1159/000490388

Source DB:  PubMed          Journal:  Intervirology        ISSN: 0300-5526            Impact factor:   1.763


  1 in total

1.  Porcine rotavirus B as primary causative agent of diarrhea outbreaks in newborn piglets.

Authors:  Flavia Megumi Miyabe; Alais Maria Dall Agnol; Raquel Arruda Leme; Thalita Evani Silva Oliveira; Selwyn Arlington Headley; Thiago Fernandes; Admilton Gonçalves de Oliveira; Alice Fernandes Alfieri; Amauri Alcindo Alfieri
Journal:  Sci Rep       Date:  2020-12-15       Impact factor: 4.379

  1 in total

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