Literature DB >> 3000769

Bombyx mori 28S ribosomal genes contain insertion elements similar to the Type I and II elements of Drosophila melanogaster.

T H Eickbush, B Robins.   

Abstract

We have examined the 28S ribosomal genes of the silkmoth, Bombyx mori, for the presence of insertion sequences. Two types of insertion sequences were found, each approximately 5 kb in length, which do not share sequence homology. Comparison of the nucleotide sequences of the junction regions with the uninserted gene reveals that one type of insertion has resulted in a 14 bp duplication of the 28S coding region at the insertion site. The location of this insertion and the 14 bp duplication are identical to that found in the Type I ribosomal insertion element of Drosophila melanogaster. The second type of insertion element is located at a site corresponding to approximately 75 bp upstream of the first type. The location of this insertion, the variability detected at its 5' junction, and a short region of sequence homology at its 3' junction suggest that it is related to the Type II element of D. melanogaster. This is the first example of a Type II-like rDNA insertion outside of sibling species of D. melanogaster, and the first example of a Type I-like rDNA insertion outside of the higher Diptera.

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Year:  1985        PMID: 3000769      PMCID: PMC554498          DOI: 10.1002/j.1460-2075.1985.tb03927.x

Source DB:  PubMed          Journal:  EMBO J        ISSN: 0261-4189            Impact factor:   11.598


  28 in total

1.  Ribosomal DNA in Drosophila melanogaster. II. Heteroduplex mapping of cloned and uncloned rDNA.

Authors:  P K Wellauer; I B Dawid
Journal:  J Mol Biol       Date:  1978-12-25       Impact factor: 5.469

2.  X and Y chromosomal ribosomal DNA of Drosophila: comparison of spacers and insertions.

Authors:  P K Wellauer; I B Dawid; K D Tartof
Journal:  Cell       Date:  1978-06       Impact factor: 41.582

3.  Occurrence of heat-dissociable ribosomal RNA in insects: the presence of three polynucleotide chains in 26 S RNA from cultured Aedes aegypti cells.

Authors:  J Shine; L Dalgarno
Journal:  J Mol Biol       Date:  1973-03-25       Impact factor: 5.469

4.  Duplicated rDNA sequences of variable lengths flanking the short type I insertions in the rDNA of Drosophila melanogaster.

Authors:  H Roiha; D M Glover
Journal:  Nucleic Acids Res       Date:  1981-11-11       Impact factor: 16.971

5.  Chracterisation of complete type II insertions in cloned segments of ribosomal DNA from Drosophila melanogaster.

Authors:  H Roiha; D M Glover
Journal:  J Mol Biol       Date:  1980-06-25       Impact factor: 5.469

6.  A DNA segment from D. melanogaster which contains five tandemly repeating units homologous to the major rDNA insertion.

Authors:  S J Kidd; D M Glover
Journal:  Cell       Date:  1980-01       Impact factor: 41.582

7.  Similarities and differences in the structure of X and Y chromosome rRNA genes of Drosophila.

Authors:  K D Tartof; I G Dawid
Journal:  Nature       Date:  1976-09-02       Impact factor: 49.962

8.  The genes for 18S, 5.8S and 28S ribosomal RNA of Bombyx mori are organized into tandem repeats of uniform length.

Authors:  R F Manning; D R Samols; L P Gage
Journal:  Gene       Date:  1978-10       Impact factor: 3.688

9.  Coding region deletions associated with the major form of rDNA interruption in Drosophila.

Authors:  P M Rae
Journal:  Nucleic Acids Res       Date:  1981-10-10       Impact factor: 16.971

10.  Ribosomal DNA genes of Bombyx mori: a minor fraction of the repeating units contain insertions.

Authors:  R Lecanidou; T H Eickbush; F C Kafatos
Journal:  Nucleic Acids Res       Date:  1984-06-11       Impact factor: 16.971

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  24 in total

1.  Site-specific ribosomal DNA insertion elements in Anopheles gambiae and A. arabiensis: nucleotide sequence of gene-element boundaries.

Authors:  S M Paskewitz; F H Collins
Journal:  Nucleic Acids Res       Date:  1989-10-25       Impact factor: 16.971

2.  The molecular through ecological genetics of abnormal abdomen. IV. Components of genetic variation in a natural population of Drosophila mercatorum.

Authors:  H Hollocher; A R Templeton; R DeSalle; J S Johnston
Journal:  Genetics       Date:  1992-02       Impact factor: 4.562

3.  Type I-like intervening sequences are found in the rDNA of the nematode Ascaris lumbricoides.

Authors:  H Neuhaus; F Müller; A Etter; H Tobler
Journal:  Nucleic Acids Res       Date:  1987-10-12       Impact factor: 16.971

4.  The site-specific ribosomal DNA insertion element R1Bm belongs to a class of non-long-terminal-repeat retrotransposons.

Authors:  Y Xiong; T H Eickbush
Journal:  Mol Cell Biol       Date:  1988-01       Impact factor: 4.272

5.  Evidence that chicken CR1 elements represent a novel family of retroposons.

Authors:  R Silva; J B Burch
Journal:  Mol Cell Biol       Date:  1989-08       Impact factor: 4.272

6.  Evolution of Y chromosomal lampbrush loop DNA sequences of Drosophila.

Authors:  P Vogt; W Hennig; D ten Hacken; P Verbost
Journal:  Chromosoma       Date:  1986       Impact factor: 4.316

Review 7.  Integration, Regulation, and Long-Term Stability of R2 Retrotransposons.

Authors:  Thomas H Eickbush; Danna G Eickbush
Journal:  Microbiol Spectr       Date:  2015-04

8.  Rex and a suppressor of Rex are repeated neomorphic loci in the Drosophila melanogaster ribosomal DNA.

Authors:  R S Rasooly; L G Robbins
Journal:  Genetics       Date:  1991-09       Impact factor: 4.562

9.  The R2 mobile element of Rhynchosciara americana: molecular, cytological and dynamic aspects.

Authors:  Paula Rezende-Teixeira; Fábio Siviero; Marina da Costa Rosa; Glaucia Maria Machado-Santelli
Journal:  Chromosome Res       Date:  2009-04-07       Impact factor: 5.239

10.  Evidence for retrotranscription of protein-coding genes in the Drosophila subobscura genome.

Authors:  G Marfany; R Gonzàlez-Duarte
Journal:  J Mol Evol       Date:  1992-12       Impact factor: 2.395

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