Literature DB >> 30004887

Cohort Harmonization and Integrative Analysis From a Biomedical Engineering Perspective.

Konstadina D Kourou, Vasileios C Pezoulas, Eleni I Georga, Themis P Exarchos, Panayiotis Tsanakas, Manolis Tsiknakis, Theodora Varvarigou, Salvatore De Vita, Athanasios Tzioufas, Dimitrios I Fotiadis.   

Abstract

In this review, the critical parts and milestones for data harmonization, from the biomedical engineering perspective, are outlined. The need for data sharing between heterogeneous sources paves the way for cohort harmonization; thus, fostering data integration and interdisciplinary research. Unmet needs in chronic diseases, as well as in other diseases, can be addressed based on the integration of patient health records and the sharing of information of the clinical picture and outcome. The stratification of patients, the determination of various clinical and outcome features, and the identification of novel biomarkers for the different phenotypes of the disease characterize the impact of cohort harmonization in patient-centered clinical research and in precision medicine. Subsequently, the establishment of matching techniques and ontologies for the creation of data schemas are also presented. The exploitation of web technologies and data-collection tools supports the opportunities to achieve new levels of integration and interoperability. Ethical and legal issues that arise when sharing and harmonizing individual-level data are discussed in order to evaluate the harmonization potential. Use cases that shape and test the harmonization approach are explicitly analyzed along with their significant results on their research objectives. Finally, future trends and directions are discussed and critically reviewed toward a roadmap in cohort harmonization for clinical medicine.

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Year:  2018        PMID: 30004887     DOI: 10.1109/RBME.2018.2855055

Source DB:  PubMed          Journal:  IEEE Rev Biomed Eng        ISSN: 1937-3333


  3 in total

Review 1.  Methods for Stratification and Validation Cohorts: A Scoping Review.

Authors:  Teresa Torres Moral; Albert Sanchez-Niubo; Anna Monistrol-Mula; Chiara Gerardi; Rita Banzi; Paula Garcia; Jacques Demotes-Mainard; Josep Maria Haro
Journal:  J Pers Med       Date:  2022-04-26

Review 2.  Shaping a data-driven era in dementia care pathway through computational neurology approaches.

Authors:  KongFatt Wong-Lin; Paula L McClean; Niamh McCombe; Daman Kaur; Jose M Sanchez-Bornot; Paddy Gillespie; Stephen Todd; David P Finn; Alok Joshi; Joseph Kane; Bernadette McGuinness
Journal:  BMC Med       Date:  2020-12-16       Impact factor: 8.775

3.  Overcoming the Barriers That Obscure the Interlinking and Analysis of Clinical Data Through Harmonization and Incremental Learning.

Authors:  Vasileios C Pezoulas; Konstantina D Kourou; Fanis Kalatzis; Themis P Exarchos; Evi Zampeli; Saviana Gandolfo; Andreas Goules; Chiara Baldini; Fotini Skopouli; Salvatore De Vita; Athanasios G Tzioufas; Dimitrios I Fotiadis
Journal:  IEEE Open J Eng Med Biol       Date:  2020-03-16
  3 in total

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