Literature DB >> 30002267

Applications of STED fluorescence nanoscopy in unravelling nanoscale structure and dynamics of biological systems.

C Roobala1, I P Ilanila, J K Basu.   

Abstract

Fluorescence microscopy, especially confocal microscopy, has revolutionized the field of biological imaging. Breaking the optical diffraction barrier of conventional light microscopy, through the advent of super-resolution microscopy, has ushered in the potential for a second revolution through unprecedented insight into nanoscale structure and dynamics in biological systems. Stimulated emission depletion (STED) microscopy is one such super-resolution microscopy technique which provides real-time enhanced-resolution imaging capabilities. In addition, it can be easily integrated with well-established fluorescence-based techniques such as fluorescence correlation spectroscopy (FCS) in order to capture the structure of cellular membranes at the nanoscale with high temporal resolution. In this review, we discuss the theory of STED and different modalities of operation in order to achieve the best resolution. Various applications of this technique in cell imaging, especially that of neuronal cell imaging, are discussed as well as examples of application of STED imaging in unravelling structure formation on biological membranes. Finally, we have discussed examples from some of our recent studies on nanoscale structure and dynamics of lipids in model membranes, due to interaction with proteins, as revealed by combination of STED and FCS techniques.

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Year:  2018        PMID: 30002267

Source DB:  PubMed          Journal:  J Biosci        ISSN: 0250-5991            Impact factor:   1.826


  79 in total

1.  Super-resolution imaging visualizes the eightfold symmetry of gp210 proteins around the nuclear pore complex and resolves the central channel with nanometer resolution.

Authors:  Anna Löschberger; Sebastian van de Linde; Marie-Christine Dabauvalle; Bernd Rieger; Mike Heilemann; Georg Krohne; Markus Sauer
Journal:  J Cell Sci       Date:  2012-02-01       Impact factor: 5.285

2.  Live-cell imaging of dendritic spines by STED microscopy.

Authors:  U Valentin Nägerl; Katrin I Willig; Birka Hein; Stefan W Hell; Tobias Bonhoeffer
Journal:  Proc Natl Acad Sci U S A       Date:  2008-11-21       Impact factor: 11.205

3.  Resolution scaling in STED microscopy.

Authors:  Benjamin Harke; Jan Keller; Chaitanya K Ullal; Volker Westphal; Andreas Schönle; Stefan W Hell
Journal:  Opt Express       Date:  2008-03-17       Impact factor: 3.894

Review 4.  Super-resolution microscopy at a glance.

Authors:  Catherine G Galbraith; James A Galbraith
Journal:  J Cell Sci       Date:  2011-05-15       Impact factor: 5.285

5.  Unraveling complex nanoscale lipid dynamics in simple model biomembranes: Insights from fluorescence correlation spectroscopy in super-resolution stimulated emission depletion mode.

Authors:  Nirod Kumar Sarangi; C Roobala; Jaydeep Kumar Basu
Journal:  Methods       Date:  2017-11-22       Impact factor: 3.608

6.  Analysis of mitochondrial dynamics and functions using imaging approaches.

Authors:  Kasturi Mitra; Jennifer Lippincott-Schwartz
Journal:  Curr Protoc Cell Biol       Date:  2010-03

7.  Nanoscale dynamics of phospholipids reveals an optimal assembly mechanism of pore-forming proteins in bilayer membranes.

Authors:  Nirod Kumar Sarangi; K G Ayappa; Sandhya S Visweswariah; Jaydeep Kumar Basu
Journal:  Phys Chem Chem Phys       Date:  2016-11-02       Impact factor: 3.676

8.  Ultrafast photon counting applied to resonant scanning STED microscopy.

Authors:  Xundong Wu; Ligia Toro; Enrico Stefani; Yong Wu
Journal:  J Microsc       Date:  2014-09-16       Impact factor: 1.758

9.  Plasticity of listeriolysin O pores and its regulation by pH and unique histidine [corrected].

Authors:  Marjetka Podobnik; Marta Marchioretto; Manuela Zanetti; Andrej Bavdek; Matic Kisovec; Miša Mojca Cajnko; Lorenzo Lunelli; Mauro Dalla Serra; Gregor Anderluh
Journal:  Sci Rep       Date:  2015-04-08       Impact factor: 4.379

10.  Nanoscale protein diffusion by STED-based pair correlation analysis.

Authors:  Paolo Bianchini; Francesco Cardarelli; Mariagrazia Di Luca; Alberto Diaspro; Ranieri Bizzarri
Journal:  PLoS One       Date:  2014-06-26       Impact factor: 3.240

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  2 in total

1.  A simple empirical algorithm for optimising depletion power and resolution for dye and system specific STED imaging.

Authors:  Christian A Combs; Dan L Sackett; Jay R Knutson
Journal:  J Microsc       Date:  2019-05-09       Impact factor: 1.758

2.  Investigation of Galectins in Frozen Tissue and Mammalian Cell Culture Using Confocal Miccroscopy.

Authors:  Daniel Giuliano Cerri; Lilian Cataldi Rodrigues; Marise Lopes Fermino; Marcelo Papoti; Richard D Cummings; Sean R Stowell; Marcelo Dias-Baruffi
Journal:  Methods Mol Biol       Date:  2022
  2 in total

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