Literature DB >> 30002203

Proteomic Analysis of NCK1/2 Adaptors Uncovers Paralog-specific Interactions That Reveal a New Role for NCK2 in Cell Abscission During Cytokinesis.

Kévin Jacquet1,2,3, Sara L Banerjee1,2,3, François J M Chartier1,2,3, Sabine Elowe2,3,4,5, Nicolas Bisson6,2,3,7.   

Abstract

Signals from cell surface receptors are often relayed via adaptor proteins. NCK1 and NCK2 are Src-Homology (SH) 2 and 3 domain adaptors that regulate processes requiring a remodeling of the actin cytoskeleton. Evidence from gene inactivation in mouse suggests that NCK1 and NCK2 are functionally redundant, although recent reports support the idea of unique functions for NCK1 and NCK2. We sought to examine this question further by delineating NCK1- and NCK2-specific signaling networks. We used both affinity purification-mass spectrometry and BioID proximity labeling to identify NCK1/2 signaling networks comprised of 98 proteins. Strikingly, we found 30 proteins restricted to NCK1 and 28 proteins specifically associated with NCK2, suggesting differences in their function. We report that Nck2 -/-, but not Nck1 -/- mouse embryo fibroblasts (MEFs) are multinucleated and display extended protrusions reminiscent of intercellular bridges, which correlate with an extended time spent in cytokinesis as well as a failure of a significant proportion of cells to complete abscission. Our data also show that the midbody of NCK2-deficient cells is not only increased in length, but also altered in composition, as judged by the mislocalization of AURKB, PLK1 and ECT2. Finally, we show that NCK2 function during cytokinesis requires its SH2 domain. Taken together, our data delineate the first high-confidence interactome for NCK1/2 adaptors and highlight several proteins specifically associated with either protein. Thus, contrary to what is generally accepted, we demonstrate that NCK1 and NCK2 are not completely redundant, and shed light on a previously uncharacterized function for the NCK2 adaptor protein in cell division.
© 2018 Jacquet et al.

Entities:  

Keywords:  Affinity proteomics; Cell biology; Cell division; Imaging; Mass Spectrometry; Networks; Phosphorylation; Protein-Protein Interactions; SH2/SH3 Domains; Signal Transduction

Mesh:

Substances:

Year:  2018        PMID: 30002203      PMCID: PMC6166670          DOI: 10.1074/mcp.RA118.000689

Source DB:  PubMed          Journal:  Mol Cell Proteomics        ISSN: 1535-9476            Impact factor:   5.911


  67 in total

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Authors:  László Buday; Livius Wunderlich; Peter Tamás
Journal:  Cell Signal       Date:  2002-09       Impact factor: 4.315

2.  Empirical statistical model to estimate the accuracy of peptide identifications made by MS/MS and database search.

Authors:  Andrew Keller; Alexey I Nesvizhskii; Eugene Kolker; Ruedi Aebersold
Journal:  Anal Chem       Date:  2002-10-15       Impact factor: 6.986

3.  Movement of membrane domains and requirement of membrane signaling molecules for cytokinesis.

Authors:  Michelle M Ng; Fred Chang; David R Burgess
Journal:  Dev Cell       Date:  2005-12       Impact factor: 12.270

4.  The SH2/SH3 adaptor Grb4 transduces B-ephrin reverse signals.

Authors:  C A Cowan; M Henkemeyer
Journal:  Nature       Date:  2001-09-13       Impact factor: 49.962

5.  Identification of Nck family genes, chromosomal localization, expression, and signaling specificity.

Authors:  M Chen; H She; E M Davis; C M Spicer; L Kim; R Ren; M M Le Beau; W Li
Journal:  J Biol Chem       Date:  1998-09-25       Impact factor: 5.157

6.  Interaction of the Nck adapter protein with p21-activated kinase (PAK1).

Authors:  G M Bokoch; Y Wang; B P Bohl; M A Sells; L A Quilliam; U G Knaus
Journal:  J Biol Chem       Date:  1996-10-18       Impact factor: 5.157

7.  Nckbeta adapter controls neuritogenesis by maintaining the cellular paxillin level.

Authors:  Shengxi Guan; Mei Chen; David Woodley; Wei Li
Journal:  Mol Cell Biol       Date:  2007-06-25       Impact factor: 4.272

8.  A promiscuous biotin ligase fusion protein identifies proximal and interacting proteins in mammalian cells.

Authors:  Kyle J Roux; Dae In Kim; Manfred Raida; Brian Burke
Journal:  J Cell Biol       Date:  2012-03-12       Impact factor: 10.539

9.  Proximity biotinylation and affinity purification are complementary approaches for the interactome mapping of chromatin-associated protein complexes.

Authors:  Jean-Philippe Lambert; Monika Tucholska; Christopher Go; James D R Knight; Anne-Claude Gingras
Journal:  J Proteomics       Date:  2014-10-02       Impact factor: 4.044

10.  2016 update of the PRIDE database and its related tools.

Authors:  Juan Antonio Vizcaíno; Attila Csordas; Noemi del-Toro; José A Dianes; Johannes Griss; Ilias Lavidas; Gerhard Mayer; Yasset Perez-Riverol; Florian Reisinger; Tobias Ternent; Qing-Wei Xu; Rui Wang; Henning Hermjakob
Journal:  Nucleic Acids Res       Date:  2015-11-02       Impact factor: 16.971

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  6 in total

1.  BioID as a Tool for Protein-Proximity Labeling in Living Cells.

Authors:  Rhiannon M Sears; Danielle G May; Kyle J Roux
Journal:  Methods Mol Biol       Date:  2019

2.  Selective role of Nck1 in atherogenic inflammation and plaque formation.

Authors:  Mabruka Alfaidi; Christina H Acosta; Dongdong Wang; James G Traylor; A Wayne Orr
Journal:  J Clin Invest       Date:  2020-08-03       Impact factor: 14.808

3.  Complementary Nck1/2 Signaling in Podocytes Controls α Actinin-4-Mediated Actin Organization, Adhesion, and Basement Membrane Composition.

Authors:  Claire E Martin; Noah J Phippen; Ava Keyvani Chahi; Manali Tilak; Sara L Banerjee; Peihua Lu; Laura A New; Casey R Williamson; Mathew J Platt; Jeremy A Simpson; Mira Krendel; Nicolas Bisson; Anne-Claude Gingras; Nina Jones
Journal:  J Am Soc Nephrol       Date:  2022-08       Impact factor: 14.978

4.  Nck1 is a critical adaptor between proatherogenic blood flow, inflammation, and atherosclerosis.

Authors:  Mary Wines-Samuelson; Sayantani Chowdhury; Bradford C Berk
Journal:  J Clin Invest       Date:  2020-08-03       Impact factor: 14.808

5.  Downregulation of Nck1 After Spinal Cord Injury in Adult Rats

Authors:  RiYun Yang; Long Zhao; JingYin Bao; YongJiang Wu; PanHui Xia; JingYing Pan
Journal:  Balkan Med J       Date:  2021-12-20       Impact factor: 2.021

6.  Clinical Relevance of Secreted Small Noncoding RNAs in an Embryo Implantation Potential Prediction at Morula and Blastocyst Development Stages.

Authors:  Angelika V Timofeeva; Ivan S Fedorov; Maria A Shamina; Vitaliy V Chagovets; Nataliya P Makarova; Elena A Kalinina; Tatiana A Nazarenko; Gennady T Sukhikh
Journal:  Life (Basel)       Date:  2021-12-01
  6 in total

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