Literature DB >> 29995972

DNA Barcoding in Forensic Entomology - Establishing a DNA Reference Library of Potentially Forensic Relevant Arthropod Species.

Caroline Chimeno1, Jérôme Morinière1, Jana Podhorna2, Laura Hardulak1, Axel Hausmann1, Frank Reckel3, Jan E Grunwald3, Randolph Penning4, Gerhard Haszprunar1.   

Abstract

Throughout the years, DNA barcoding has gained in importance in forensic entomology as it leads to fast and reliable species determination. High-quality results, however, can only be achieved with a comprehensive DNA barcode reference database at hand. In collaboration with the Bavarian State Criminal Police Office, we have initiated at the Bavarian State Collection of Zoology the establishment of a reference library containing arthropods of potential forensic relevance to be used for DNA barcoding applications. CO1-5P' DNA barcode sequences of hundreds of arthropods were obtained via DNA extraction, PCR and Sanger Sequencing, leading to the establishment of a database containing 502 high-quality sequences which provide coverage for 88 arthropod species. Furthermore, we demonstrate an application example of this library using it as a backbone to a high throughput sequencing analysis of arthropod bulk samples collected from human corpses, which enabled the identification of 31 different arthropod Barcode Index Numbers.
© 2018 American Academy of Forensic Sciences.

Entities:  

Keywords:  Cytochrome C Oxidase 1; DNA barcoding; DNA reference library; bulk sample analysis; forensic entomology; forensic science; high throughput sequencing; next generation sequencing

Mesh:

Substances:

Year:  2018        PMID: 29995972     DOI: 10.1111/1556-4029.13869

Source DB:  PubMed          Journal:  J Forensic Sci        ISSN: 0022-1198            Impact factor:   1.832


  4 in total

1.  A DNA barcode library for 5,200 German flies and midges (Insecta: Diptera) and its implications for metabarcoding-based biomonitoring.

Authors:  Jérôme Morinière; Michael Balke; Dieter Doczkal; Matthias F Geiger; Laura A Hardulak; Gerhard Haszprunar; Axel Hausmann; Lars Hendrich; Ledis Regalado; Björn Rulik; Stefan Schmidt; Johann-Wolfgang Wägele; Paul D N Hebert
Journal:  Mol Ecol Resour       Date:  2019-05-14       Impact factor: 7.090

2.  Molecular identification of the potentially forensically relevant cluster flies Pollenia rudis (Fabricius) and Pollenia vagabunda (Meigen) (Diptera: Polleniidae) - non-recorded species in Algeria.

Authors:  Meriem Taleb; Ghania Tail; Halide Nihal Açıkgöz
Journal:  Forensic Sci Res       Date:  2021-02-22

3.  Plant DNA Barcode as a Tool for Root Identification in Hypogea: The Case of the Etruscan Tombs of Tarquinia (Central Italy).

Authors:  Daniela Isola; Flavia Bartoli; Simone Langone; Simona Ceschin; Laura Zucconi; Giulia Caneva
Journal:  Plants (Basel)       Date:  2021-06-03

4.  Peering into the Darkness: DNA Barcoding Reveals Surprisingly High Diversity of Unknown Species of Diptera (Insecta) in Germany.

Authors:  Caroline Chimeno; Axel Hausmann; Stefan Schmidt; Michael J Raupach; Dieter Doczkal; Viktor Baranov; Jeremy Hübner; Amelie Höcherl; Rosa Albrecht; Mathias Jaschhof; Gerhard Haszprunar; Paul D N Hebert
Journal:  Insects       Date:  2022-01-12       Impact factor: 2.769

  4 in total

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