| Literature DB >> 29995972 |
Caroline Chimeno1, Jérôme Morinière1, Jana Podhorna2, Laura Hardulak1, Axel Hausmann1, Frank Reckel3, Jan E Grunwald3, Randolph Penning4, Gerhard Haszprunar1.
Abstract
Throughout the years, DNA barcoding has gained in importance in forensic entomology as it leads to fast and reliable species determination. High-quality results, however, can only be achieved with a comprehensive DNA barcode reference database at hand. In collaboration with the Bavarian State Criminal Police Office, we have initiated at the Bavarian State Collection of Zoology the establishment of a reference library containing arthropods of potential forensic relevance to be used for DNA barcoding applications. CO1-5P' DNA barcode sequences of hundreds of arthropods were obtained via DNA extraction, PCR and Sanger Sequencing, leading to the establishment of a database containing 502 high-quality sequences which provide coverage for 88 arthropod species. Furthermore, we demonstrate an application example of this library using it as a backbone to a high throughput sequencing analysis of arthropod bulk samples collected from human corpses, which enabled the identification of 31 different arthropod Barcode Index Numbers.Entities:
Keywords: Cytochrome C Oxidase 1; DNA barcoding; DNA reference library; bulk sample analysis; forensic entomology; forensic science; high throughput sequencing; next generation sequencing
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Year: 2018 PMID: 29995972 DOI: 10.1111/1556-4029.13869
Source DB: PubMed Journal: J Forensic Sci ISSN: 0022-1198 Impact factor: 1.832