Literature DB >> 29994411

Unsupervised Learning for Cell-Level Visual Representation in Histopathology Images With Generative Adversarial Networks.

Bo Hu, Ye Tang, Eric I-Chao Chang, Yubo Fan, Maode Lai, Yan Xu.   

Abstract

The visual attributes of cells, such as the nuclear morphology and chromatin openness, are critical for histopathology image analysis. By learning cell-level visual representation, we can obtain a rich mix of features that are highly reusable for various tasks, such as cell-level classification, nuclei segmentation, and cell counting. In this paper, we propose a unified generative adversarial networks architecture with a new formulation of loss to perform robust cell-level visual representation learning in an unsupervised setting. Our model is not only label-free and easily trained but also capable of cell-level unsupervised classification with interpretable visualization, which achieves promising results in the unsupervised classification of bone marrow cellular components. Based on the proposed cell-level visual representation learning, we further develop a pipeline that exploits the varieties of cellular elements to perform histopathology image classification, the advantages of which are demonstrated on bone marrow datasets.

Entities:  

Year:  2018        PMID: 29994411     DOI: 10.1109/JBHI.2018.2852639

Source DB:  PubMed          Journal:  IEEE J Biomed Health Inform        ISSN: 2168-2194            Impact factor:   5.772


  8 in total

Review 1.  Relevant Applications of Generative Adversarial Networks in Drug Design and Discovery: Molecular De Novo Design, Dimensionality Reduction, and De Novo Peptide and Protein Design.

Authors:  Eugene Lin; Chieh-Hsin Lin; Hsien-Yuan Lane
Journal:  Molecules       Date:  2020-07-16       Impact factor: 4.411

Review 2.  Strategies to Reduce the Expert Supervision Required for Deep Learning-Based Segmentation of Histopathological Images.

Authors:  Yves-Rémi Van Eycke; Adrien Foucart; Christine Decaestecker
Journal:  Front Med (Lausanne)       Date:  2019-10-15

Review 3.  Generative Adversarial Networks in Digital Pathology and Histopathological Image Processing: A Review.

Authors:  Laya Jose; Sidong Liu; Carlo Russo; Annemarie Nadort; Antonio Di Ieva
Journal:  J Pathol Inform       Date:  2021-11-03

4.  Synthesis of Microscopic Cell Images Obtained from Bone Marrow Aspirate Smears through Generative Adversarial Networks.

Authors:  Debapriya Hazra; Yung-Cheol Byun; Woo Jin Kim; Chul-Ung Kang
Journal:  Biology (Basel)       Date:  2022-02-10

5.  Infection of lung megakaryocytes and platelets by SARS-CoV-2 anticipate fatal COVID-19.

Authors:  Aiwei Zhu; Fernando Real; Claude Capron; Arielle R Rosenberg; Aymeric Silvin; Garett Dunsmore; Jaja Zhu; Andréa Cottoignies-Callamarte; Jean-Marc Massé; Pierre Moine; Simon Bessis; Mathieu Godement; Guillaume Geri; Jean-Daniel Chiche; Silvana Valdebenito; Sandrine Belouzard; Jean Dubuisson; Geoffroy Lorin de la Grandmaison; Sylvie Chevret; Florent Ginhoux; Eliseo A Eugenin; Djillali Annane; Elisabeth Cramer Bordé; Morgane Bomsel
Journal:  Cell Mol Life Sci       Date:  2022-06-16       Impact factor: 9.207

6.  Hybrid AI-assistive diagnostic model permits rapid TBS classification of cervical liquid-based thin-layer cell smears.

Authors:  Xiaohui Zhu; Xiaoming Li; Kokhaur Ong; Wenli Zhang; Wencai Li; Longjie Li; David Young; Yongjian Su; Bin Shang; Linggan Peng; Wei Xiong; Yunke Liu; Wenting Liao; Jingjing Xu; Feifei Wang; Qing Liao; Shengnan Li; Minmin Liao; Yu Li; Linshang Rao; Jinquan Lin; Jianyuan Shi; Zejun You; Wenlong Zhong; Xinrong Liang; Hao Han; Yan Zhang; Na Tang; Aixia Hu; Hongyi Gao; Zhiqiang Cheng; Li Liang; Weimiao Yu; Yanqing Ding
Journal:  Nat Commun       Date:  2021-06-10       Impact factor: 14.919

7.  TilGAN: GAN for Facilitating Tumor-Infiltrating Lymphocyte Pathology Image Synthesis With Improved Image Classification.

Authors:  Monjoy Saha; Xiaoyuan Guo; Ashish Sharma
Journal:  IEEE Access       Date:  2021-05-28       Impact factor: 3.367

8.  A deep adversarial variational autoencoder model for dimensionality reduction in single-cell RNA sequencing analysis.

Authors:  Eugene Lin; Sudipto Mukherjee; Sreeram Kannan
Journal:  BMC Bioinformatics       Date:  2020-02-21       Impact factor: 3.169

  8 in total

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