Literature DB >> 29994314

A Fungus Spores Dataset and a Convolutional Neural Network Based Approach for Fungus Detection.

Muhammad Waseem Tahir, Nayyer Abbas Zaidi, Adeel Akhtar Rao, Roland Blank, Michael J Vellekoop, Walter Lang.   

Abstract

Fungus is enormously notorious for food, human health, and archives. Fungus sign and symptoms in medical science are non-specific and asymmetrical for extremely large areas resulting into a challenging task of fungal detection. Various traditional and computer vision techniques were applied to meet the challenge of early fungus detection. On the other hand, features learned through the convolutional neural network (CNN) provided state-of-the-art results in many other applications of object detection and classification. However, the large amount of data is an essential prerequisite for its effective application. In pursuing this idea, we present a novel fungus dataset of its kind, with the goal of advancing the state of the art in fungus classification by placing the question of fungus detection. This is achieved by gathering various images of complex fungal spores by extracting samples from contaminated fruits, archives, and laboratory-incubated fungus colonies. These images primarily consisted of five different types of fungus spores and dirt. An optical sensor system was utilized to obtain these images, which were further annotated to mark fungal spores as a region of interest using specially designed graphical user interface. As a result, 40,800 labeled images were used to develop the fungus dataset to aid in precise fungus detection and classification. The other main objective of this research was to develop a CNN-based approach for the detection of fungus and distinguish different types of fungus. A CNN architecture was designed, and it showed the promising results with an accuracy of 94.8%. The obtained results proved the possibility of early detection of several types of fungus spores using CNN and could estimate all possible threats due to fungus.

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Year:  2018        PMID: 29994314     DOI: 10.1109/TNB.2018.2839585

Source DB:  PubMed          Journal:  IEEE Trans Nanobioscience        ISSN: 1536-1241            Impact factor:   2.935


  5 in total

1.  Deep convolutional neural network: a novel approach for the detection of Aspergillus fungi via stereomicroscopy.

Authors:  Haozhong Ma; Jinshan Yang; Xiaolu Chen; Xinyu Jiang; Yimin Su; Shanlei Qiao; Guowei Zhong
Journal:  J Microbiol       Date:  2021-03-29       Impact factor: 3.422

2.  A state-of-the-art survey of object detection techniques in microorganism image analysis: from classical methods to deep learning approaches.

Authors:  Pingli Ma; Chen Li; Md Mamunur Rahaman; Yudong Yao; Jiawei Zhang; Shuojia Zou; Xin Zhao; Marcin Grzegorzek
Journal:  Artif Intell Rev       Date:  2022-06-07       Impact factor: 9.588

3.  Applications of artificial neural networks in microorganism image analysis: a comprehensive review from conventional multilayer perceptron to popular convolutional neural network and potential visual transformer.

Authors:  Jinghua Zhang; Chen Li; Yimin Yin; Jiawei Zhang; Marcin Grzegorzek
Journal:  Artif Intell Rev       Date:  2022-05-04       Impact factor: 9.588

Review 4.  Machine Learning and Deep Learning Based Computational Approaches in Automatic Microorganisms Image Recognition: Methodologies, Challenges, and Developments.

Authors:  Priya Rani; Shallu Kotwal; Jatinder Manhas; Vinod Sharma; Sparsh Sharma
Journal:  Arch Comput Methods Eng       Date:  2021-08-31       Impact factor: 8.171

5.  Automatic Fungi Recognition: Deep Learning Meets Mycology.

Authors:  Lukáš Picek; Milan Šulc; Jiří Matas; Jacob Heilmann-Clausen; Thomas S Jeppesen; Emil Lind
Journal:  Sensors (Basel)       Date:  2022-01-14       Impact factor: 3.576

  5 in total

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