Literature DB >> 29982935

Anaerococcus jeddahensis sp. nov., a New Bacterial Species Isolated From Healthy Nomadic Bedouin Woman From Saudi Arabia.

Niokhor Dione1, Sara Bellali1, Muhammad Yasir2, Esam I Azhar2,3, Fehmida Bibi2, Mamadou Beye1, Nicholas Armstrong1, Frédéric Cadoret1, Asif A Jiman-Fatani3, Nayel Helmy4, Jaishriram Rathored1, Noémie Labas1, Pierre-Edouard Fournier1, Didier Raoult1,2, Jean-Christophe Lagier5.   

Abstract

An understanding of the microbial diversity of the human body has generated significant interest in recent years. With the advent of MALDI-TOF mass spectrometry, high-speed sequencing, and the rebirth of microbial culture, knowledge of human microbiota is growing. Using culturomics, a strategy to explore the microbial diversity of samples, coupled with a taxono-genomic strategy, we isolated a new bacterium named Anaerococcus jeddahensis sp. nov. strain SB3T. This strain was isolated from the stool sample of a healthy nomadic Bedouin woman from Saudi Arabia. Here, we describe the characteristics of this organism, and the complete genome sequence and annotation. Strain SB3T is a Gram-positive obligate anaerobic coccus which is non-motile and non-spore forming. Fatty acid analysis shows that the major fatty acid is by far hexadecanoic acid (C16:0; 52%). Its genome is 1,903,534 bp long and has 29.70 mol% of G+C content. It contains 1756 protein-coding genes and 53 RNA genes. These results show that strategy provides a better understanding of the microorganism and that is a good methodology for microbial identification and characterization.

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Year:  2018        PMID: 29982935     DOI: 10.1007/s00284-018-1538-5

Source DB:  PubMed          Journal:  Curr Microbiol        ISSN: 0343-8651            Impact factor:   2.188


  30 in total

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Authors:  A Pfleiderer; J-C Lagier; F Armougom; C Robert; B Vialettes; D Raoult
Journal:  Eur J Clin Microbiol Infect Dis       Date:  2013-06-02       Impact factor: 3.267

2.  Determination of 16S ribosomal RNA sequences of all members of the genus Peptostreptococcus and their phylogenetic position.

Authors:  N Li; Y Hashimoto; T Ezaki
Journal:  FEMS Microbiol Lett       Date:  1994-02-01       Impact factor: 2.742

Review 3.  Gram-positive anaerobic cocci.

Authors:  D A Murdoch
Journal:  Clin Microbiol Rev       Date:  1998-01       Impact factor: 26.132

4.  Septic arthritis in a native joint due to Anaerococcus prevotii.

Authors:  S Jain; V Bui; C Spencer; L Yee
Journal:  J Clin Pathol       Date:  2008-03-14       Impact factor: 3.411

5.  PHAST: a fast phage search tool.

Authors:  You Zhou; Yongjie Liang; Karlene H Lynch; Jonathan J Dennis; David S Wishart
Journal:  Nucleic Acids Res       Date:  2011-06-14       Impact factor: 16.971

6.  The complex vaginal flora of West African women with bacterial vaginosis.

Authors:  Jacques Pépin; Sylvie Deslandes; Geneviève Giroux; François Sobéla; Nzambi Khonde; Soumaila Diakité; Sophie Demeule; Annie-Claude Labbé; Nathalie Carrier; Eric Frost
Journal:  PLoS One       Date:  2011-09-20       Impact factor: 3.240

7.  Dakarella massiliensis gen. nov., sp. nov., strain ND3T: a new bacterial genus isolated from the female genital tract.

Authors:  N Dione; J Rathored; E Tomei; J-C Lagier; S Khelaifia; C Robert; F Bretelle; D Raoult; P-E Fournier; F Fenollar
Journal:  New Microbes New Infect       Date:  2017-05-12

8.  DNAPlotter: circular and linear interactive genome visualization.

Authors:  Tim Carver; Nick Thomson; Alan Bleasby; Matthew Berriman; Julian Parkhill
Journal:  Bioinformatics       Date:  2008-11-05       Impact factor: 6.937

9.  Non-contiguous finished genome sequence and description of Anaerococcus provenciensis sp. nov.

Authors:  Isabelle Pagnier; Olivier Croce; Catherine Robert; Didier Raoult; Bernard La Scola
Journal:  Stand Genomic Sci       Date:  2014-04-10

10.  Genome sequence and description of Anaerosalibacter massiliensis sp. nov.

Authors:  N Dione; S A Sankar; J-C Lagier; S Khelaifia; C Michele; N Armstrong; M Richez; J Abrahão; D Raoult; P-E Fournier
Journal:  New Microbes New Infect       Date:  2016-01-11
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  2 in total

1.  Gut Microbiota and Short-Chain Fatty Acid Profile between Normal and Moderate Malnutrition Children in Yogyakarta, Indonesia.

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Journal:  Microorganisms       Date:  2021-01-07

2.  Anaerococcus ihuae sp. nov. and Mediannikoviicoccus vaginalis gen. nov., sp. nov., two new bacteria isolated from human vaginal samples.

Authors:  Claudia Ly; Linda Abou Chacra; Eva Birsal; Gabriel Haddad; Cheikh Ibrahima Lo; Nicholas Amstrong; Stéphane Alibar; Blandine Courbière; Florence Bretelle; Florence Fenollar
Journal:  Arch Microbiol       Date:  2022-07-20       Impact factor: 2.667

  2 in total

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