Literature DB >> 29975512

Development of Cell-Based Sentinels for Nitric Oxide: Ensuring Marker Expression and Unimodality.

Ryan McKay1,2, Pricila Hauk1,2, David Quan1,2, William E Bentley1,2.   

Abstract

We generated "sentinel" bacteria that respond to the biomarker nitric oxide (NO) and produce a homogeneous and strong fluorescent response. Our dual-plasmid system consists of a signal "relay" vector that employs an NO-responsive promoter that amplifies the native signal (via expression of T7 Polymerase (T7Pol)) to a second vector responsible for GFP expression. Importantly, to achieve an optimal "sentinel" response, we developed strategies that balance the transcriptional load within cells by altering (i) translation and (ii) activity of the T7Pol. Our optimized genetic circuitry was then used to transform commensal E. coli Nissle, as a proof-of-concept toward an ingestible cell-based sensor for Crohn's disease (CD) that, in turn, is marked by elevated levels of intestinal NO. Thus, the "biosensors" demonstrated here may serve as a simple diagnostic tool, contrasting the standard of care including colonoscopies or biopsies.

Entities:  

Keywords:  biosensor; inflammatory bowel disease; probiotics; signal amplification; synthetic biology

Mesh:

Substances:

Year:  2018        PMID: 29975512      PMCID: PMC7025431          DOI: 10.1021/acssynbio.8b00146

Source DB:  PubMed          Journal:  ACS Synth Biol        ISSN: 2161-5063            Impact factor:   5.110


  45 in total

1.  Optimization of recombinant protein expression level in Escherichia coli by flow cytometry and cell sorting.

Authors:  Elena Soriano; Nicole Borth; Hermann Katinger; Diethard Mattanovich
Journal:  Biotechnol Bioeng       Date:  2002-10-05       Impact factor: 4.530

Review 2.  What are biomarkers?

Authors:  Kyle Strimbu; Jorge A Tavel
Journal:  Curr Opin HIV AIDS       Date:  2010-11       Impact factor: 4.283

3.  Programmable bacteria detect and record an environmental signal in the mammalian gut.

Authors:  Jonathan W Kotula; S Jordan Kerns; Lev A Shaket; Layla Siraj; James J Collins; Jeffrey C Way; Pamela A Silver
Journal:  Proc Natl Acad Sci U S A       Date:  2014-03-17       Impact factor: 11.205

4.  Nitric oxide production in Caco-2 cells exposed to different inducers, inhibitors and natural toxins.

Authors:  A L Vignoli; R C Srivastava; A Stammati; L Turco; M Tanori; F Zucco
Journal:  Toxicol In Vitro       Date:  2001 Aug-Oct       Impact factor: 3.500

Review 5.  Engineering commensal bacteria for prophylaxis against infection.

Authors:  Yih-Lin Goh; HongFei He; John C March
Journal:  Curr Opin Biotechnol       Date:  2012-03-28       Impact factor: 9.740

6.  Manipulation of the quorum sensing signal AI-2 affects the antibiotic-treated gut microbiota.

Authors:  Jessica Ann Thompson; Rita Almeida Oliveira; Ana Djukovic; Carles Ubeda; Karina Bivar Xavier
Journal:  Cell Rep       Date:  2015-03-24       Impact factor: 9.423

7.  Use of bacteriophage T7 lysozyme to improve an inducible T7 expression system.

Authors:  F W Studier
Journal:  J Mol Biol       Date:  1991-05-05       Impact factor: 5.469

8.  Measurement and modeling of nitric oxide release rates for nitric oxide donors.

Authors:  A Ramamurthi; R S Lewis
Journal:  Chem Res Toxicol       Date:  1997-04       Impact factor: 3.739

9.  Autonomous induction of recombinant proteins by minimally rewiring native quorum sensing regulon of E. coli.

Authors:  Chen-Yu Tsao; Sara Hooshangi; Hsuan-Chen Wu; James J Valdes; William E Bentley
Journal:  Metab Eng       Date:  2010-01-11       Impact factor: 9.783

10.  Autonomous bacterial localization and gene expression based on nearby cell receptor density.

Authors:  Hsuan-Chen Wu; Chen-Yu Tsao; David N Quan; Yi Cheng; Matthew D Servinsky; Karen K Carter; Kathleen J Jee; Jessica L Terrell; Amin Zargar; Gary W Rubloff; Gregory F Payne; James J Valdes; William E Bentley
Journal:  Mol Syst Biol       Date:  2013       Impact factor: 11.429

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  7 in total

1.  Homologous Quorum Sensing Regulatory Circuit: A Dual-Input Genetic Controller for Modulating Quorum Sensing-Mediated Protein Expression in E. coli.

Authors:  Pricila Hauk; Kristina Stephens; Chelsea Virgile; Eric VanArsdale; Alex Eli Pottash; John S Schardt; Steven M Jay; Herman O Sintim; William E Bentley
Journal:  ACS Synth Biol       Date:  2020-09-15       Impact factor: 5.110

2.  Engineering Escherichia coli for enhanced sensitivity to the autoinducer-2 quorum sensing signal.

Authors:  Kristina Stephens; Amin Zargar; Milad Emamian; Nadia Abutaleb; Erica Choi; David N Quan; Gregory Payne; William E Bentley
Journal:  Biotechnol Prog       Date:  2019-08-10

Review 3.  Translating New Synthetic Biology Advances for Biosensing Into the Earth and Environmental Sciences.

Authors:  Ilenne Del Valle; Emily M Fulk; Prashant Kalvapalle; Jonathan J Silberg; Caroline A Masiello; Lauren B Stadler
Journal:  Front Microbiol       Date:  2021-02-04       Impact factor: 5.640

Review 4.  Novel technologies to characterize and engineer the microbiome in inflammatory bowel disease.

Authors:  Alba Boix-Amorós; Hilary Monaco; Elisa Sambataro; Jose C Clemente
Journal:  Gut Microbes       Date:  2022 Jan-Dec

5.  Surveying the Genetic Design Space for Transcription Factor-Based Metabolite Biosensors: Synthetic Gamma-Aminobutyric Acid and Propionate Biosensors in E. coli Nissle 1917.

Authors:  Matthew Lebovich; Lauren B Andrews
Journal:  Front Bioeng Biotechnol       Date:  2022-08-25

6.  A platform of genetically engineered bacteria as vehicles for localized delivery of therapeutics: Toward applications for Crohn's disease.

Authors:  Ryan McKay; Monil Ghodasra; John Schardt; David Quan; Alex Eli Pottash; Wu Shang; Steven M Jay; Gregory F Payne; Matthew Wook Chang; John C March; William E Bentley
Journal:  Bioeng Transl Med       Date:  2018-09-23

7.  A redox-based electrogenetic CRISPR system to connect with and control biological information networks.

Authors:  Narendranath Bhokisham; Eric VanArsdale; Kristina T Stephens; Pricila Hauk; Gregory F Payne; William E Bentley
Journal:  Nat Commun       Date:  2020-05-15       Impact factor: 14.919

  7 in total

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