Literature DB >> 29972803

Fluid Phase Coexistence in Biological Membrane: Insights from Local Nonaffine Deformation of Lipids.

Sahithya S Iyer1, Madhusmita Tripathy1, Anand Srivastava2.   

Abstract

Lateral heterogeneities in biomembranes play a crucial role in various physiological functions of the cell. Such heterogeneities lead to demixing of lipid constituents and formation of distinct liquid domains in the membrane. We study lateral heterogeneities in terms of topological rearrangements of lipids to identify the liquid-liquid phase coexistence in model membranes. Using ideas from the physics of amorphous systems and glasses, we calculate the degree of nonaffine deformation associated with individual lipids to characterize the liquid-ordered (Lo) and liquid-disordered (Ld) regions in model lipid bilayers. We explore the usage of this method on all-atom and coarse-grained lipid bilayer trajectories. This method is helpful in defining the instantaneous Lo-Ld domain boundaries in complex multicomponent bilayer systems. The characterization is also used to highlight the effect of line-active molecules on the phase boundaries and domain mixing. Overall, we propose a framework to explore the molecular origin of spatial and dynamical heterogeneity in biomembrane systems, which can be exploited not only in computer simulations but also in experiments.
Copyright © 2018 Biophysical Society. Published by Elsevier Inc. All rights reserved.

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Year:  2018        PMID: 29972803      PMCID: PMC6035292          DOI: 10.1016/j.bpj.2018.05.021

Source DB:  PubMed          Journal:  Biophys J        ISSN: 0006-3495            Impact factor:   4.033


  78 in total

1.  Liquid domains in vesicles investigated by NMR and fluorescence microscopy.

Authors:  S L Veatch; I V Polozov; K Gawrisch; S L Keller
Journal:  Biophys J       Date:  2004-05       Impact factor: 4.033

2.  The energy landscapes and motions of proteins.

Authors:  H Frauenfelder; S G Sligar; P G Wolynes
Journal:  Science       Date:  1991-12-13       Impact factor: 47.728

3.  Effect of line tension on the lateral organization of lipid membranes.

Authors:  Ana J García-Sáez; Salvatore Chiantia; Petra Schwille
Journal:  J Biol Chem       Date:  2007-09-11       Impact factor: 5.157

4.  Condensation of the plasma membrane at the site of T lymphocyte activation.

Authors:  Katharina Gaus; Elena Chklovskaia; Barbara Fazekas de St Groth; Wendy Jessup; Thomas Harder
Journal:  J Cell Biol       Date:  2005-10-03       Impact factor: 10.539

Review 5.  Giant plasma membrane vesicles: models for understanding membrane organization.

Authors:  Kandice R Levental; Ilya Levental
Journal:  Curr Top Membr       Date:  2015-04-17       Impact factor: 3.049

6.  Line tensions, correlation lengths, and critical exponents in lipid membranes near critical points.

Authors:  Aurelia R Honerkamp-Smith; Pietro Cicuta; Marcus D Collins; Sarah L Veatch; Marcel den Nijs; M Schick; Sarah L Keller
Journal:  Biophys J       Date:  2008-04-18       Impact factor: 4.033

Review 7.  An introduction to critical points for biophysicists; observations of compositional heterogeneity in lipid membranes.

Authors:  Aurelia R Honerkamp-Smith; Sarah L Veatch; Sarah L Keller
Journal:  Biochim Biophys Acta       Date:  2008-10-01

8.  Lipid lateral diffusion in ordered and disordered phases in raft mixtures.

Authors:  Andrey Filippov; Greger Orädd; Göran Lindblom
Journal:  Biophys J       Date:  2004-02       Impact factor: 4.033

9.  Sphingolipid-cholesterol rafts diffuse as small entities in the plasma membrane of mammalian cells.

Authors:  A Pralle; P Keller; E L Florin; K Simons; J K Hörber
Journal:  J Cell Biol       Date:  2000-03-06       Impact factor: 10.539

10.  Sorting of sphingolipids in epithelial (Madin-Darby canine kidney) cells.

Authors:  G van Meer; E H Stelzer; R W Wijnaendts-van-Resandt; K Simons
Journal:  J Cell Biol       Date:  1987-10       Impact factor: 10.539

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  3 in total

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Authors:  Kristen Woods; Liam Sharp; Grace Brannigan
Journal:  J Membr Biol       Date:  2019-07-18       Impact factor: 1.843

2.  Boundary lipids of the nicotinic acetylcholine receptor: Spontaneous partitioning via coarse-grained molecular dynamics simulation.

Authors:  Liam Sharp; Reza Salari; Grace Brannigan
Journal:  Biochim Biophys Acta Biomembr       Date:  2019-01-18       Impact factor: 3.747

3.  Non-affinity in multi-material mechanical metamaterials.

Authors:  M J Mirzaali; H Pahlavani; E Yarali; A A Zadpoor
Journal:  Sci Rep       Date:  2020-07-13       Impact factor: 4.379

  3 in total

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