Literature DB >> 29971718

High-Speed Optical Tweezers for the Study of Single Molecular Motors.

L Gardini1,2, A Tempestini1,3, F S Pavone1,2,3, M Capitanio4,5.   

Abstract

Mechanical transitions in molecular motors often occur on a submillisecond time scale and rapidly follow binding of the motor with its cytoskeletal filament. Interactions of nonprocessive molecular motors with their filament can be brief and last for few milliseconds or fraction of milliseconds. The investigation of such rapid events and their load dependence requires specialized single-molecule tools. Ultrafast force-clamp spectroscopy is a constant-force optical tweezers technique that allows probing such rapid mechanical transitions and submillisecond kinetics of biomolecular interactions, which can be particularly valuable for the study of nonprocessive motors, single heads of processive motors, or stepping dynamics of processive motors. Here we describe a step-by-step protocol for the application of ultrafast force-clamp spectroscopy to myosin motors. We give indications on optimizing the optical tweezers setup, biological constructs, and data analysis to reach a temporal resolution of few tens of microseconds combined with subnanometer spatial resolution. The protocol can be easily generalized to other families of motor proteins.

Entities:  

Keywords:  Force spectroscopy; Molecular motors; Myosin; Optical tweezers; Single-molecule biophysics

Mesh:

Substances:

Year:  2018        PMID: 29971718     DOI: 10.1007/978-1-4939-8556-2_9

Source DB:  PubMed          Journal:  Methods Mol Biol        ISSN: 1064-3745


  7 in total

1.  Ultra-fast force-clamp spectroscopy data on the interaction between skeletal muscle myosin and actin.

Authors:  Manuela Maffei; Diego Beneventi; Monica Canepari; Roberto Bottinelli; Francesco Saverio Pavone; Marco Capitanio
Journal:  Data Brief       Date:  2019-05-23

2.  Data on the target search by a single protein on DNA measured with ultrafast force-clamp spectroscopy.

Authors:  Carina Monico; Alessia Tempestini; Lucia Gardini; Francesco Saverio Pavone; Marco Capitanio
Journal:  Data Brief       Date:  2019-04-28

3.  Myosin V fluorescence imaging dataset for single-molecule localization and tracking.

Authors:  Lucia Gardini; Claudia Arbore; Francesco Saverio Pavone; Marco Capitanio
Journal:  Data Brief       Date:  2019-05-23

4.  Single molecule mechanics resolves the earliest events in force generation by cardiac myosin.

Authors:  Michael S Woody; Donald A Winkelmann; Marco Capitanio; E Michael Ostap; Yale E Goldman
Journal:  Elife       Date:  2019-09-17       Impact factor: 8.140

5.  Out-of-Equilibrium Biophysical Chemistry: The Case for Multidimensional, Integrated Single-Molecule Approaches.

Authors:  Narendar Kolimi; Ashok Pabbathi; Nabanita Saikia; Feng Ding; Hugo Sanabria; Joshua Alper
Journal:  J Phys Chem B       Date:  2021-09-10       Impact factor: 3.466

6.  α-catenin switches between a slip and an asymmetric catch bond with F-actin to cooperatively regulate cell junction fluidity.

Authors:  C Arbore; M Sergides; L Gardini; G Bianchi; A V Kashchuk; I Pertici; P Bianco; F S Pavone; M Capitanio
Journal:  Nat Commun       Date:  2022-03-03       Impact factor: 14.919

7.  A protocol for single molecule imaging and tracking of processive myosin motors.

Authors:  Lucia Gardini; Claudia Arbore; Marco Capitanio; Francesco Saverio Pavone
Journal:  MethodsX       Date:  2019-08-23
  7 in total

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