| Literature DB >> 29971086 |
Maliheh Eftekhari1, Abbas Yadollahi1, Hamed Ahmadi2, Abdolali Shojaeiyan1, Mahdi Ayyari1.
Abstract
High performance liquid chromatography data related to the concentrations of 12 phenolic compounds in vegetative parts, measured at four sampling times were processed for developing prediction models, based on the cultivar, grapevine organ, growth stage, total flavonoid content (TFC), total reducing capacity (TRC), and total antioxidant activity (TAA). 12 Artificial neural network (ANN) models were developed with 79 input variables and different number of neurons in the hidden layer, for the prediction of 12 phenolics. The results confirmed that the developed ANN-models (R2 = 0.90 - 0.97) outperform the stepwise regression models (R2 = 0.05 - 0.78). Moreover, the sensitivity of the model outputs against each input variable was computed by using ANN and it was revealed that the key determinant of phenolic concentration was the source organ of the grapevine. The ANN prediction technique represents a promising approach to predict targeted phenolic levels in vegetative parts of the grapevine.Entities:
Keywords: bioactive compounds; grapevine waste; neural network; prediction; regression
Year: 2018 PMID: 29971086 PMCID: PMC6018394 DOI: 10.3389/fpls.2018.00837
Source DB: PubMed Journal: Front Plant Sci ISSN: 1664-462X Impact factor: 5.753
Levels of variables according to the factorial arrangement of 1890 data related to phenolic compounds concentrations measured by HPLC.
| Sample | Cultivara | Organb | TimeC | TRCd | TFCe | TAAf | GALg | CAT | PC | RUT | IQ | MC | OC | COM | RES | QUE | NAR | KAE |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 1 | 1 | 3340.9 | 10020.5 | 10573.9 | 58.4 | 81.7 | 37.7 | 599.1 | 209.2 | 42.7 | 137.7 | 1141.1 | 142.4 | 74.5 | 0.0 | 0.0 | |
| 1 | 1 | 1 | 2338.3 | 10031.3 | 10332.5 | 61.4 | 88.3 | 38.1 | 590.5 | 214.0 | 42.6 | 142.7 | 1148.5 | 142.0 | 72.5 | 0.0 | 0.0 | |
| 1 | 1 | 2 | 6548.8 | 8550.8 | 9420.6 | 58.0 | 2969.0 | 94.2 | 560.6 | 274.5 | 48.9 | 413.3 | 1156.9 | 142.4 | 315.7 | 0.0 | 33.5 | |
| 1 | 1 | 2 | 6521.3 | 8548.4 | 9392.1 | 59.0 | 3282.9 | 72.1 | 604.2 | 296.7 | 51.4 | 291.4 | 1252.8 | 152.7 | 349.5 | 0.0 | 33.3 | |
| 1 | 2 | 2 | 33263.6 | 1101.8 | 102571.5 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 238.7 | 0.0 | 516.1 | 0.0 | 0.0 | |
| 1 | 2 | 2 | 32379.0 | 1046.9 | 103011.3 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 246.7 | 0.0 | 527.1 | 0.0 | 0.0 | |
| 1 | 2 | 3 | 2331.3 | 309.5 | 8491.6 | 0.0 | 48.2 | 0.0 | 0.0 | 22.3 | 24.2 | 0.0 | 0.0 | 34.6 | 73.1 | 0.0 | 0.0 | |
| 1 | 2 | 3 | 2408.6 | 303.5 | 8361.2 | 0.0 | 48.0 | 0.0 | 0.0 | 22.9 | 24.8 | 0.0 | 0.0 | 29.5 | 75.6 | 0.0 | 0.0 | |
| 1 | 2 | 3 | 2369.9 | 306.5 | 8426.4 | 0.0 | 48.1 | 0.0 | 0.0 | 22.6 | 24.5 | 0.0 | 0.0 | 32.0 | 74.4 | 0.0 | 0.0 | |
| 1 | 1 | 4 | 10092.7 | 10377.4 | 11029.5 | 93.3 | 1022.5 | 104.8 | 793.8 | 1004.3 | 71.2 | 9604.4 | 80.5 | 67.2 | 357.0 | 37.2 | 158.7 | |
| 1 | 1 | 4 | 6458.8 | 10752.3 | 10833.8 | 89.9 | 1007.7 | 105.4 | 811.6 | 1024.1 | 71.8 | 9778.3 | 82.7 | 68.7 | 372.6 | 38.9 | 109.0 | |
| 1 | 1 | 4 | 8275.8 | 10564.9 | 10931.6 | 91.6 | 1015.1 | 105.1 | 802.7 | 1014.2 | 71.5 | 9691.3 | 81.6 | 68.0 | 364.8 | 38.1 | 133.9 | |
| 1 | 2 | 4 | 976.3 | 1329.4 | 9163.6 | 0.0 | 38.5 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 60.6 | 0.0 | 0.0 | |
| 1 | 2 | 4 | 2487.0 | 1419.0 | 9076.3 | 0.0 | 38.5 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 60.6 | 0.0 | 0.0 | |
| 2 | 1 | 1 | 4347.2 | 10412.6 | 10498.6 | 72.2 | 130.9 | 50.8 | 956.4 | 220.3 | 36.1 | 126.9 | 1384.7 | 113.7 | 95.8 | 0.0 | 0.0 | |
| 2 | 1 | 1 | 5571.5 | 10326.2 | 11585.8 | 72.9 | 134.1 | 50.6 | 964.8 | 229.7 | 38.7 | 394.7 | 1440.7 | 119.6 | 99.8 | 0.0 | 0.0 | |
| 2 | 2 | 2 | 24965.2 | 1406.6 | 104444.9 | 0.0 | 0.0 | 0.0 | 0.0 | 203.6 | 0.0 | 0.0 | 230.3 | 0.0 | 503.5 | 0.0 | 0.0 | |
| 2 | 1 | 3 | 1260.1 | 13656.5 | 12302.3 | 60.2 | 1852.4 | 42.4 | 119.4 | 45.0 | 29.2 | 6336.2 | 80.1 | 47.4 | 95.2 | 0.0 | 0.0 | |
| 2 | 1 | 3 | 1111.3 | 13486.3 | 12582.2 | 60.5 | 2058.3 | 45.0 | 125.8 | 22.6 | 29.7 | 6908.3 | 86.5 | 49.4 | 99.2 | 0.0 | 32.3 | |
| 2 | 2 | 3 | 2659.8 | 39.1 | 8291.4 | 0.0 | 60.9 | 0.0 | 0.0 | 24.0 | 0.0 | 0.0 | 0.0 | 47.9 | 72.0 | 0.0 | 0.0 | |
| 2 | 2 | 3 | 2626.3 | 48.8 | 8196.3 | 0.0 | 54.4 | 0.0 | 0.0 | 22.8 | 0.0 | 0.0 | 0.0 | 43.8 | 68.3 | 0.0 | 0.0 | |
| 2 | 1 | 4 | 14007.8 | 10370.0 | 11521.0 | 123.1 | 3607.1 | 135.8 | 1429.9 | 1102.5 | 77.0 | 2551.4 | 93.3 | 96.4 | 830.3 | 47.0 | 370.0 | |
| 2 | 1 | 4 | 15739.3 | 10501.8 | 11420.1 | 101.8 | 2784.1 | 114.7 | 1180.9 | 932.3 | 68.0 | 1434.1 | 81.8 | 116.3 | 717.8 | 45.8 | 327.0 | |
| … | … | … | … | … | … | … | … | … | … | … | … | … | … | … | … | … | … | |
| 59 | 1 | 2 | 1795.4 | 10518.1 | 10351.8 | 101.9 | 231.1 | 54.1 | 831.1 | 170.3 | 348.5 | 617.8 | 80.0 | 68.0 | 11337.0 | 100.8 | 366.8 | |
| 39 | 1 | 4 | 5393.4 | 10584.1 | 10966.1 | 90.1 | 438.0 | 126.9 | 372.1 | 47.1 | 64.6 | 3711.7 | 37.5 | 2168.6 | 236.2 | 52.8 | 203.8 | |
| 67 | 1 | 4 | 7185.9 | 10557.0 | 10146.9 | 102.0 | 1762.5 | 98.3 | 904.3 | 219.8 | 261.5 | 253.1 | 0.0 | 207.5 | 397.4 | 48.9 | 189.6 | |
| 70 | 1 | 4 | 12013.9 | 14094.8 | 14572.4 | 149.7 | 6225.3 | 690.6 | 1477.2 | 485.2 | 243.0 | 6325.8 | 0.0 | 291.3 | 533.0 | 80.2 | 174.2 | |
| 21 | 1 | 3 | 4991.5 | 10275.7 | 10304.2 | 82.8 | 193.3 | 1192.3 | 1190.2 | 48.5 | 60.1 | 700.6 | 259.5 | 125.9 | 13123.2 | 12.8 | 156.6 | |
| 22 | 1 | 3 | 1192.2 | 10510.0 | 9755.9 | 88.6 | 112.4 | 879.9 | 1071.7 | 40.0 | 43.4 | 1709.6 | 164.8 | 45.5 | 18220.8 | 0.0 | 139.9 | |
| 59 | 1 | 4 | 6001.2 | 10592.6 | 9477.2 | 96.3 | 698.8 | 188.6 | 872.9 | 282.8 | 268.7 | 1477.5 | 1110.7 | 266.8 | 661.8 | 49.7 | 118.7 | |
| … | … | … | … | … | … | … | … | … | … | … | … | … | … | … | … | … | … | |
Stepwise regression model of cultivar, organ (leaf or stem), month (July, August, September, and October), TRC, TFC, and TAA for different measured phenolics content of V. vinifera foliara.
| Measured factor | Variablea | Parameter estimation | Standard error |
|---|---|---|---|
| Gallic acid | 111.45986 | 6.17210 | |
| -67.80296 | 3.03427 | ||
| 6.33617 | 0.60438 | ||
| 0.00043 | 0.00006 | ||
| 0.00079 | 0.00032 | ||
| 0.78380 | |||
| RMSEb | 16.87642 | ||
| MBEC | 8.90901 | ||
| Catechin | |||
| 690.33232 | 138.70621 | ||
| -215.99405 | 34.93546 | ||
| -0.01073 | 0.00180 | ||
| 0.02550 | 0.00589 | ||
| 0.08383 | 0.00589 | ||
| 0.20350 | |||
| RMSE | 888.37214 | ||
| MBE | 546.28009 | ||
| 269.28027 | 15.44732 | ||
| -115.13223 | 9.21706 | ||
| -1.07779 | 0.20843 | ||
| 0.00163 | 0.00037 | ||
| 0.19460 | |||
| RMSE | 101.06410 | ||
| MBE | 61.11106 | ||
| Rutin | |||
| 776.67442 | 35.50774 | ||
| -407.04701 | 21.12686 | ||
| 0.00998 | 0.00148 | ||
| -2.21759 | 0.41505 | ||
| 31.43606 | 9.05637 | ||
| -0.00105 | 0.00048 | ||
| 0.33550 | |||
| RMSE | 223.31979 | ||
| MBE | 156.03616 | ||
| Isoquercitrin | |||
| 447.57991 | 20.82450 | ||
| -200.06385 | 12.73737 | ||
| 0.00743 | 0.00096 | ||
| -1.36077 | 0.26954 | ||
| -0.00130 | 0.00029 | ||
| 0.2796 | |||
| RMSE | 124.35464 | ||
| MBE | 94.42968 | ||
| 104.20099 | 7.86134 | ||
| -63.64240 | 4.62065 | ||
| 0.00163 | 0.00020 | ||
| 9.08716 | 2.04670 | ||
| 0.11200 | |||
| RMSE | 64.32313 | ||
| MBE | 39.04541 | ||
| 0.04527 | 0.01659 | ||
| 390.38893 | 31.47157 | ||
| 0.02274 | 0.00313 | ||
| -739.79659 | 158.00088 | ||
| 0.17610 | |||
| RMSE | 820.62908 | ||
| MBE | 399.13679 | ||
| Coumarin | |||
| 1526.68644 | 59.78865 | ||
| -462.00556 | 39.17702 | ||
| -170.17934 | 16.81054 | ||
| -0.00382 | 0.00088 | ||
| 0.00547 | 0.00275 | ||
| 0.47530 | |||
| RMSE | 382.57347 | ||
| MBE | 246.86150 | ||
| Resveratrol | |||
| 436.31941 | 50.74028 | ||
| -235.66322 | 27.79515 | ||
| 1.47387 | 0.69026 | ||
| 0.05860 | |||
| RMSE | 307.85297 | ||
| MBE | 110.67512 | ||
| Quercetin | |||
| 0.10599 | 0.01387 | ||
| -7.02131 | 3.12538 | ||
| 0.04740 | |||
| RMSE | 1322.70590 | ||
| MBE | 535.04881 | ||
| Naringenin | |||
| 15.29345 | 2.26374 | ||
| -19.70467 | 1.20828 | ||
| 6.36006 | 0.53486 | ||
| 0.00038 | 0.00005 | ||
| 0.07100 | 0.02650 | ||
| 0.21260 | |||
| RMSE | 11.72686 | ||
| MBE | 7.69754 | ||
| Kaempferol | |||
| -23.91979 | 5.30187 | ||
| 9.96098 | 1.70531 | ||
| 0.00412 | 0.00042 | ||
| 0.12590 | |||
| RMSE | 32.28414 | ||
| MBE | 22.06913 | ||
Statistics and information on artificial neural network models for measured phenolics in leaf and stem extracts of V. vinifera during 4 months (training vs. testing values).
| Compound | RMSEa | MBEb | ||
|---|---|---|---|---|
| Gallic acid | Training | 0.9937 | 3.17 | 1.27 |
| Testing | 0.9723 | 6.02 | 1.97 | |
| Catechin | Training | 0.9615 | 228.41 | 93.25 |
| Testing | 0.9176 | 283.87 | 118.06 | |
| Training | 0.9674 | 25.53 | 9.58 | |
| Testing | 0.9257 | 30.76 | 14.44 | |
| Rutin | Training | 0.9695 | 56.42 | 33.19 |
| Testing | 0.9228 | 75.21 | 42.16 | |
| Isoquercitrin | Training | 0.9684 | 35.30 | 20.08 |
| Testing | 0.9179 | 41.07 | 25.41 | |
| Training | 0.9361 | 17.51 | 9.04 | |
| Testing | 0.9196 | 19.38 | 11.39 | |
| Training | 0.9801 | 159.72 | 53.93 | |
| Testing | 0.9247 | 251.31 | 84.27 | |
| Coumarin | Training | 0.9405 | 142.92 | 49.21 |
| Testing | 0.9129 | 156.44 | 62.26 | |
| Resveratrol | Training | 0.9114 | 133.30 | 37.72 |
| Testing | 0.9179 | 95.88 | 47.30 | |
| Quercetin | Training | 0.9315 | 526.26 | 168.05 |
| Testing | 0.9606 | 275.36 | 146.74 | |
| Naringenin | Training | 0.9495 | 4.35 | 1.79 |
| Testing | 0.9027 | 3.92 | 1.96 | |
| Kaempferol | Training | 0.90 | 20.48 | 8.65 |
| Testing | 0.903 | 10.37 | 6.57 | |
Importance of evaluated factors on phenolics content of grapevine vegetative parts according to the sensitivity analysis on the developed neural network models.
| Element | VSRa | |||||
|---|---|---|---|---|---|---|
| Organ | Month | Cultivar | TRC | TFC | TAA | |
| Gallic acid | 57.00 | 22.95 | 21.54 | 15.55 | 13.04 | 2.37 |
| Rank | 1 | 2 | 3 | 4 | 5 | 6 |
| Catechin | 77.62 | 23.30 | 19.84 | 5.68 | 1.88 | 1.69 |
| Rank | 1 | 2 | 3 | 4 | 5 | 6 |
| 23.34 | 17.98 | 12.94 | 2.19 | 2.17 | 2.02 | |
| Rank | 1 | 2 | 3 | 4 | 5 | 6 |
| Rutin | 88.00 | 36.63 | 35.95 | 9.36 | 5.67 | 1.88 |
| Rank | 1 | 2 | 3 | 4 | 5 | 6 |
| Isoquercitrin | 34.04 | 17.36 | 14.92 | 2.31 | 1.10 | 1.33 |
| Rank | 1 | 2 | 3 | 4 | 6 | 5 |
| 15.62 | 9.83 | 7.71 | 1.42 | 1.32 | 1.28 | |
| Rank | 1 | 2 | 3 | 4 | 5 | 6 |
| 27.64 | 14.70 | 10.99 | 1.73 | 1.45 | 3.35 | |
| Rank | 1 | 2 | 3 | 5 | 6 | 4 |
| Coumarin | 19.77 | 11.66 | 7.46 | 1.60 | 1.37 | 1.26 |
| Rank | 1 | 2 | 3 | 4 | 5 | 6 |
| Resveratrol | 41.27 | 15.17 | 10.65 | 3.27 | 1.28 | 1.21 |
| Rank | 1 | 2 | 3 | 4 | 5 | 6 |
| Quercetin | 39.54 | 16.33 | 11.76 | 1.08 | 4.70 | 1.16 |
| Rank | 1 | 2 | 3 | 6 | 4 | 5 |
| Naringenin | 21.37 | 8.46 | 6.91 | 1.20 | 2.33 | 1.03 |
| Rank | 1 | 2 | 3 | 5 | 4 | 6 |
| Kaempferol | 68.86 | 10.78 | 7.03 | 1.43 | 3.48 | 1.20 |
| Rank | 1 | 2 | 3 | 5 | 4 | 6 |
Structure of artificial neural networks used to build models for prediction of phenolics concentrations.
| Phenolic compound | Number of input layer(s) | Number of hidden layer neurons | Number of output layer(s) |
|---|---|---|---|
| Gallic acid | 79 | 7 | 1 |
| Catechin | 79 | 8 | 1 |
| 79 | 8 | 1 | |
| Rutin | 79 | 6 | 1 |
| Isoquercitrin | 79 | 9 | 1 |
| 79 | 8 | 1 | |
| 79 | 8 | 1 | |
| Coumarin | 79 | 7 | 1 |
| Resveratrol | 79 | 6 | 1 |
| Quercetin | 79 | 7 | 1 |
| Naringenin | 79 | 10 | 1 |
| Kaempferol | 79 | 7 | 1 |