Literature DB >> 29968183

X-ray-Based 3D Virtual Histology-Adding the Next Dimension to Histological Analysis.

J Albers1, S Pacilé2,3, M A Markus4, M Wiart5, G Vande Velde6, G Tromba3, C Dullin7,8,9.   

Abstract

Histology and immunohistochemistry of thin tissue sections have been the standard diagnostic procedure in many diseases for decades. This method is highly specific for particular tissue regions or cells, but mechanical sectioning of the specimens is required, which destroys the sample in the process and can lead to non-uniform tissue deformations. In addition, regions of interest cannot be located beforehand and the analysis is intrinsically two-dimensional. Micro X-ray computed tomography (μCT) on the other hand can provide 3D images at high resolution and allows for quantification of tissue structures, as well as the localization of small regions of interest. These advantages advocate the use of μCT for virtual histology tool with or without subsequent classical histology. This review summarizes the most recent examples of virtual histology and provides currently known possibilities of improving contrast and resolution of μCT. Following a background in μCT imaging, ex vivo staining procedures for contrast enhancement are presented as well as label-free virtual histology approaches and the technologies, which could rapidly advance it, such as phase-contrast CT. Novel approaches such as zoom tomography and nanoparticulate contrast agents will also be considered. The current evidence suggests that virtual histology may present a valuable addition to the workflow of histological analysis, potentially reducing the workload in pathology, refining tissue classification, and supporting the detection of small malignancies.

Entities:  

Keywords:  Histology; Phase contrast; Soft-tissue staining; Synchrotron; X-ray imaging; μCT

Mesh:

Year:  2018        PMID: 29968183     DOI: 10.1007/s11307-018-1246-3

Source DB:  PubMed          Journal:  Mol Imaging Biol        ISSN: 1536-1632            Impact factor:   3.488


  67 in total

1.  Visualization of 3D osteon morphology by synchrotron radiation micro-CT.

Authors:  D M L Cooper; B Erickson; A G Peele; K Hannah; C D L Thomas; J G Clement
Journal:  J Anat       Date:  2011-06-06       Impact factor: 2.610

2.  Synchrotron inline phase contrast µCT enables detailed virtual histology of embedded soft-tissue samples with and without staining.

Authors:  Mara Saccomano; Jonas Albers; Giuliana Tromba; Marina Dobrivojević Radmilović; Srećko Gajović; Frauke Alves; Christian Dullin
Journal:  J Synchrotron Radiat       Date:  2018-05-31       Impact factor: 2.616

3.  Synchrotron radiation X-ray phase micro-computed tomography as a new method to detect iron oxide nanoparticles in the brain.

Authors:  M Marinescu; M Langer; A Durand; C Olivier; A Chabrol; H Rositi; F Chauveau; T H Cho; N Nighoghossian; Y Berthezène; F Peyrin; M Wiart
Journal:  Mol Imaging Biol       Date:  2013-10       Impact factor: 3.488

4.  Extending two-dimensional histology into the third dimension through conventional micro computed tomography.

Authors:  Anna Khimchenko; Hans Deyhle; Georg Schulz; Gabriel Schweighauser; Jürgen Hench; Natalia Chicherova; Christos Bikis; Simone E Hieber; Bert Müller
Journal:  Neuroimage       Date:  2016-06-14       Impact factor: 6.556

5.  Photon counting spectral CT versus conventional CT: comparative evaluation for breast imaging application.

Authors:  Polad M Shikhaliev; Shannon G Fritz
Journal:  Phys Med Biol       Date:  2011-03-02       Impact factor: 3.609

6.  The efficacy of using computer-aided detection (CAD) for detection of breast cancer in mammography screening: a systematic review.

Authors:  Emilie L Henriksen; Jonathan F Carlsen; Ilse Mm Vejborg; Michael B Nielsen; Carsten A Lauridsen
Journal:  Acta Radiol       Date:  2018-04-17       Impact factor: 1.990

7.  microMRI-HREM pipeline for high-throughput, high-resolution phenotyping of murine embryos.

Authors:  Guido Pieles; Stefan H Geyer; Dorota Szumska; Jürgen Schneider; Stefan Neubauer; Kieran Clarke; Karl Dorfmeister; Angela Franklyn; Steve D Brown; Shoumo Bhattacharya; Wolfgang J Weninger
Journal:  J Anat       Date:  2007-05-28       Impact factor: 2.610

8.  Quantitative analysis of amyloid plaques in a mouse model of Alzheimer's disease by phase-contrast X-ray computed tomography.

Authors:  K Noda-Saita; A Yoneyama; Y Shitaka; Y Hirai; K Terai; J Wu; T Takeda; K Hyodo; N Osakabe; T Yamaguchi; M Okada
Journal:  Neuroscience       Date:  2006-02-07       Impact factor: 3.590

9.  Ultrastructural properties in cortical bone vary greatly in two inbred strains of mice as assessed by synchrotron light based micro- and nano-CT.

Authors:  Philipp Schneider; Martin Stauber; Romain Voide; Marco Stampanoni; Leah Rae Donahue; Ralph Müller
Journal:  J Bone Miner Res       Date:  2007-10       Impact factor: 6.741

10.  μCT of ex-vivo stained mouse hearts and embryos enables a precise match between 3D virtual histology, classical histology and immunochemistry.

Authors:  Christian Dullin; Roser Ufartes; Emanuel Larsson; Sabine Martin; Marcio Lazzarini; Giuliana Tromba; Jeannine Missbach-Guentner; Diana Pinkert-Leetsch; Dörthe M Katschinski; Frauke Alves
Journal:  PLoS One       Date:  2017-02-08       Impact factor: 3.240

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  10 in total

1.  Introduction: 3D imaging in lung biology.

Authors:  Christian Mühlfeld; Douglas J Taatjes
Journal:  Histochem Cell Biol       Date:  2021-02       Impact factor: 4.304

2.  Brain virtual histology with X-ray phase-contrast tomography Part I: whole-brain myelin mapping in white-matter injury models.

Authors:  Matthieu Chourrout; Hugo Rositi; Elodie Ong; Violaine Hubert; Alexandre Paccalet; Louis Foucault; Awen Autret; Barbara Fayard; Cécile Olivier; Radu Bolbos; Françoise Peyrin; Claire Crola-da-Silva; David Meyronet; Olivier Raineteau; Héléne Elleaume; Emmanuel Brun; Fabien Chauveau; Marlene Wiart
Journal:  Biomed Opt Express       Date:  2022-02-23       Impact factor: 3.732

3.  Brain virtual histology with X-ray phase-contrast tomography Part II:3D morphologies of amyloid-β plaques in Alzheimer's disease models.

Authors:  Matthieu Chourrout; Margaux Roux; Carlie Boisvert; Coralie Gislard; David Legland; Ignacio Arganda-Carreras; Cécile Olivier; Françoise Peyrin; Hervé Boutin; Nicolas Rama; Thierry Baron; David Meyronet; Emmanuel Brun; Hugo Rositi; Marlène Wiart; Fabien Chauveau
Journal:  Biomed Opt Express       Date:  2022-02-23       Impact factor: 3.732

4.  Cryogenic contrast-enhanced microCT enables nondestructive 3D quantitative histopathology of soft biological tissues.

Authors:  Arne Maes; Camille Pestiaux; Alice Marino; Tim Balcaen; Lisa Leyssens; Sarah Vangrunderbeeck; Grzegorz Pyka; Wim M De Borggraeve; Luc Bertrand; Christophe Beauloye; Sandrine Horman; Martine Wevers; Greet Kerckhofs
Journal:  Nat Commun       Date:  2022-10-20       Impact factor: 17.694

5.  Virtual histology of archaeological human deciduous prenatal enamel through synchrotron X-ray computed microtomography images.

Authors:  Alessia Nava; Patrick Mahoney; Luca Bondioli; Alfredo Coppa; Emanuela Cristiani; Luciano Fattore; Gina McFarlane; Diego Dreossi; Lucia Mancini
Journal:  J Synchrotron Radiat       Date:  2022-01-01       Impact factor: 2.616

6.  Elastic transformation of histological slices allows precise co-registration with microCT data sets for a refined virtual histology approach.

Authors:  Jonas Albers; Angelika Svetlove; Justus Alves; Alexander Kraupner; Francesca di Lillo; M Andrea Markus; Giuliana Tromba; Frauke Alves; Christian Dullin
Journal:  Sci Rep       Date:  2021-05-25       Impact factor: 4.379

7.  A quantitative analysis of 3D-cell distribution in regenerating muscle-skeletal system with synchrotron X-ray computed microtomography.

Authors:  Markéta Tesařová; Lucia Mancini; Andras Simon; Igor Adameyko; Markéta Kaucká; Ahmed Elewa; Gabriele Lanzafame; Yi Zhang; Dominika Kalasová; Bára Szarowská; Tomáš Zikmund; Marie Novotná; Jozef Kaiser
Journal:  Sci Rep       Date:  2018-09-20       Impact factor: 4.379

8.  X-ray Micro-Computed Tomography for Nondestructive Three-Dimensional (3D) X-ray Histology.

Authors:  Orestis L Katsamenis; Michael Olding; Jane A Warner; David S Chatelet; Mark G Jones; Giacomo Sgalla; Bennie Smit; Oliver J Larkin; Ian Haig; Luca Richeldi; Ian Sinclair; Peter M Lackie; Philipp Schneider
Journal:  Am J Pathol       Date:  2019-05-22       Impact factor: 4.307

9.  Synchrotron Radiation-based X-ray phase-contrast imaging of the aortic walls in acute aortic dissection.

Authors:  Koki Yokawa; Masato Hoshino; Naoto Yagi; Yutaka Nakashima; Kazunori Nakagawa; Yutaka Okita; Kenji Okada; Takuro Tsukube
Journal:  JVS Vasc Sci       Date:  2020-07-16

10.  X-ray microtomosynthesis of unstained pathology tissue samples.

Authors:  David T Nguyen; Thomas C Larsen; Muyang Wang; Russel H Knutsen; Zhihong Yang; Eric E Bennett; Dumitru Mazilu; Zu-Xi Yu; Xi Tao; Danielle R Donahue; Ahmed M Gharib; Christopher K E Bleck; Joel Moss; Alan T Remaley; Beth A Kozel; Han Wen
Journal:  J Microsc       Date:  2021-02-18       Impact factor: 1.758

  10 in total

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