Literature DB >> 29967958

The complete genomic sequence of a novel botybirnavirus isolated from a phytopathogenic Bipolaris maydis.

Haoran Wang1, Cong Li1,2,3, Lina Cai1, Shouguo Fang1, Limin Zheng2,3, Fei Yan4, Songbai Zhang5, Yong Liu6,7.   

Abstract

Bipolaris maydis is the causal agent of corn southern leaf blight. Here, we report a novel double-stranded RNA (dsRNA) mycovirus designated Bipolaris maydis botybirnavirus 1 (BmBRV1) from B. maydis strain JZ11 in Jingzhou, Hubei province of China. BmBRV1 has a genome consisting of two dsRNAs (dsRNA1 and dsRNA2) with a size of 6435 and 5987 bp, respectively, each of which contains a single open reading frame (ORF). The two polyproteins encoded by dsRNA1 and dsRNA2 share the highest amino acid identities of 81.8 and 75.3%, respectively, with the RdRp and coat protein of Sclerotinia sclerotiorum botybirnavirus 1 (SsBRV1), a tentative species of the genus Botybirnavirus. Phylogenetic analysis based on the amino acid sequences of RdRp indicated that BmBRV1 belongs to a distinct species of the newly proposed family Botybirnaviridae.

Entities:  

Keywords:  Bipolaris maydis; Bipolaris maydis botybirnavirus 1; Botybirnavirus

Mesh:

Year:  2018        PMID: 29967958     DOI: 10.1007/s11262-018-1584-x

Source DB:  PubMed          Journal:  Virus Genes        ISSN: 0920-8569            Impact factor:   2.332


  12 in total

1.  Basic local alignment search tool.

Authors:  S F Altschul; W Gish; W Miller; E W Myers; D J Lipman
Journal:  J Mol Biol       Date:  1990-10-05       Impact factor: 5.469

2.  Rapid amplification of cDNA ends (RACE).

Authors:  Oladapo Yeku; Michael A Frohman
Journal:  Methods Mol Biol       Date:  2011

Review 3.  Viruses of plant pathogenic fungi.

Authors:  Said A Ghabrial; Nobuhiro Suzuki
Journal:  Annu Rev Phytopathol       Date:  2009       Impact factor: 13.078

Review 4.  50-plus years of fungal viruses.

Authors:  Said A Ghabrial; José R Castón; Daohong Jiang; Max L Nibert; Nobuhiro Suzuki
Journal:  Virology       Date:  2015-03-13       Impact factor: 3.616

5.  Molecular characterization of a bipartite double-stranded RNA virus and its satellite-like RNA co-infecting the phytopathogenic fungus Sclerotinia sclerotiorum.

Authors:  Lijiang Liu; Qihua Wang; Jiasen Cheng; Yanping Fu; Daohong Jiang; Jiatao Xie
Journal:  Front Microbiol       Date:  2015-05-06       Impact factor: 5.640

6.  MEGA7: Molecular Evolutionary Genetics Analysis Version 7.0 for Bigger Datasets.

Authors:  Sudhir Kumar; Glen Stecher; Koichiro Tamura
Journal:  Mol Biol Evol       Date:  2016-03-22       Impact factor: 16.240

7.  CDD: NCBI's conserved domain database.

Authors:  Aron Marchler-Bauer; Myra K Derbyshire; Noreen R Gonzales; Shennan Lu; Farideh Chitsaz; Lewis Y Geer; Renata C Geer; Jane He; Marc Gwadz; David I Hurwitz; Christopher J Lanczycki; Fu Lu; Gabriele H Marchler; James S Song; Narmada Thanki; Zhouxi Wang; Roxanne A Yamashita; Dachuan Zhang; Chanjuan Zheng; Stephen H Bryant
Journal:  Nucleic Acids Res       Date:  2014-11-20       Impact factor: 16.971

8.  Characterization of a novel bipartite double-stranded RNA mycovirus conferring hypovirulence in the phytopathogenic fungus Botrytis porri.

Authors:  Mingde Wu; Fengyin Jin; Jing Zhang; Long Yang; Daohong Jiang; Guoqing Li
Journal:  J Virol       Date:  2012-04-11       Impact factor: 5.103

9.  Characterization of a novel botybirnavirus isolated from a phytopathogenic Alternaria fungus.

Authors:  Jun Xiang; Min Fu; Ni Hong; Lifeng Zhai; Feng Xiao; Guoping Wang
Journal:  Arch Virol       Date:  2017-09-11       Impact factor: 2.574

10.  Co-infection of a hypovirulent isolate of Sclerotinia sclerotiorum with a new botybirnavirus and a strain of a mitovirus.

Authors:  Hongchang Ran; Lijiang Liu; Bo Li; Jiasen Cheng; Yanping Fu; Daohong Jiang; Jiatao Xie
Journal:  Virol J       Date:  2016-06-06       Impact factor: 4.099

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  1 in total

1.  Characterization of a Botybirnavirus Conferring Hypovirulence in the Phytopathogenic Fungus Botryosphaeria dothidea.

Authors:  Lifeng Zhai; Mengmeng Yang; Meixin Zhang; Ni Hong; Guoping Wang
Journal:  Viruses       Date:  2019-03-17       Impact factor: 5.048

  1 in total

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