Literature DB >> 29963685

Genotype-Phenotype Correlations of Dystrophic Epidermolysis Bullosa in India: Experience from a Tertiary Care Centre.

Vamsi K Yenamandra1, Shamsudheen K Vellarikkal, Madhumita R Chowdhury, Rijith Jayarajan, Ankit Verma, Vinod Scaria, Sridhar Sivasubbu, Subrata Basu Ray, Amit K Dinda, Madhulika Kabra, Vinod K Sharma, Gomathy Sethuraman.   

Abstract

Recent advances in the field of genomics have seen the successful implementation of whole exome sequencing as a rapid and efficient diagnostic strategy in several genodermatoses. The aim of this study was to explore the potential of molecular studies in dystrophic epidermolysis bullosa (DEB) in India. Whole exome sequencing was performed using genomic DNA from each case of epidermolysis bullosa, followed by massively parallel sequencing. Resulting reads were mapped to the human reference genome hg19. Sanger sequencing subsequently confirmed the potentially pathogenic mutations. Whole exome sequencing of 18 patients with DEB from 17 unrelated Indian families revealed 20 distinct sequence variants in the COL7A1 gene including 2 widely prevalent mutations. Dominant inheritance was seen in 7 patients, while 11 patients showed a highly variable recessive DEB. This preliminary study using exome sequencing is clearly encouraging and will serve as the basis for future large-scale molecular studies to actively identify and understand DEB in the Indian population.

Entities:  

Keywords:  collagenVII; dystrophicEB; wholeexomesequencing

Mesh:

Substances:

Year:  2018        PMID: 29963685     DOI: 10.2340/00015555-2929

Source DB:  PubMed          Journal:  Acta Derm Venereol        ISSN: 0001-5555            Impact factor:   4.437


  5 in total

1.  Previously Unreported COL7A1 Mutation in a Somali Patient with Dystrophic Epidermolysis Bullosa.

Authors:  Valeria Venti; Bruna Scalia; Alessandra Sauna; Maria Rita Nasca; Pierluigi Smilari; Andrea D Praticò; Agata Fiumara; Xena G Pappalardo; Piero Pavone
Journal:  Mol Syndromol       Date:  2019-11-16

2.  Epidermolysis Bullosa: A Report of Three Cases with Novel Heterozygous Deletions in PLEC and Homozygous Non sense Mutations in COL7A1 Genes.

Authors:  Sunitha Tella; Shehnaz Sultana; Sujatha Madireddy; Pratibha Nallari; Venkateshwari Ananthapur
Journal:  Indian J Dermatol       Date:  2022 Jan-Feb       Impact factor: 1.757

Review 3.  Genomics of rare genetic diseases-experiences from India.

Authors:  Sridhar Sivasubbu; Vinod Scaria
Journal:  Hum Genomics       Date:  2019-09-25       Impact factor: 4.639

4.  Epidermolysis Bullosa Registry Data in Iran.

Authors:  Siamak Farokhforghani; Mohammad Javad Fatemi; Parinaz Ghanooni; Faraz Asadpour; Shirin Araghi; Afshin Nouri
Journal:  World J Plast Surg       Date:  2021-09

5.  Novel and very rare causative variants in the COL7A1 gene of Vietnamese patients with recessive dystrophic epidermolysis bullosa revealed by whole-exome sequencing.

Authors:  Thi Huyen Thuong Ma; Thi Lan Anh Luong; Thu Lan Hoang; Thi Thanh Hoa Nguyen; Thi Ha Vu; Van Khoa Tran; Duy Bac Nguyen; Tien Sang Trieu; Hai Ha Nguyen; Van Hai Nong; Dang Ton Nguyen
Journal:  Mol Genet Genomic Med       Date:  2021-07-19       Impact factor: 2.183

  5 in total

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