Literature DB >> 29962288

Bayesian quantile regression joint models: Inference and dynamic predictions.

Ming Yang1, Sheng Luo2, Stacia DeSantis1.   

Abstract

In the traditional joint models of a longitudinal and time-to-event outcome, a linear mixed model assuming normal random errors is used to model the longitudinal process. However, in many circumstances, the normality assumption is violated and the linear mixed model is not an appropriate sub-model in the joint models. In addition, as the linear mixed model models the conditional mean of the longitudinal outcome, it is not appropriate if clinical interest lies in making inference or prediction on median, lower, or upper ends of the longitudinal process. To this end, quantile regression provides a flexible, distribution-free way to study covariate effects at different quantiles of the longitudinal outcome and it is robust not only to deviation from normality, but also to outlying observations. In this article, we present and advocate the linear quantile mixed model for the longitudinal process in the joint models framework. Our development is motivated by a large prospective study of Huntington's disease where primary clinical interest is in utilizing longitudinal motor scores and other early covariates to predict the risk of developing Huntington's disease. We develop a Bayesian method based on the location-scale representation of the asymmetric Laplace distribution, assess its performance through an extensive simulation study, and demonstrate how this linear quantile mixed model-based joint models approach can be used for making subject-specific dynamic predictions of survival probability.

Entities:  

Keywords:  Asymmetric Laplace distribution; Bayesian inference; Huntington’s disease; Markov Chain Monte Carlo; linear quantile mixed model

Year:  2018        PMID: 29962288      PMCID: PMC6050160          DOI: 10.1177/0962280218784757

Source DB:  PubMed          Journal:  Stat Methods Med Res        ISSN: 0962-2802            Impact factor:   3.021


  9 in total

1.  Time-dependent ROC curves for censored survival data and a diagnostic marker.

Authors:  P J Heagerty; T Lumley; M S Pepe
Journal:  Biometrics       Date:  2000-06       Impact factor: 2.571

2.  Quantile regression for longitudinal data using the asymmetric Laplace distribution.

Authors:  Marco Geraci; Matteo Bottai
Journal:  Biostatistics       Date:  2006-04-24       Impact factor: 5.899

3.  Dynamic predictions and prospective accuracy in joint models for longitudinal and time-to-event data.

Authors:  Dimitris Rizopoulos
Journal:  Biometrics       Date:  2011-02-09       Impact factor: 2.571

4.  Longitudinal quantile regression in the presence of informative dropout through longitudinal-survival joint modeling.

Authors:  Alessio Farcomeni; Sara Viviani
Journal:  Stat Med       Date:  2014-12-09       Impact factor: 2.373

5.  Prediction of manifest Huntington's disease with clinical and imaging measures: a prospective observational study.

Authors:  Jane S Paulsen; Jeffrey D Long; Christopher A Ross; Deborah L Harrington; Cheryl J Erwin; Janet K Williams; Holly James Westervelt; Hans J Johnson; Elizabeth H Aylward; Ying Zhang; H Jeremy Bockholt; Roger A Barker
Journal:  Lancet Neurol       Date:  2014-11-03       Impact factor: 44.182

6.  Random-effects models for longitudinal data.

Authors:  N M Laird; J H Ware
Journal:  Biometrics       Date:  1982-12       Impact factor: 2.571

7.  Preparing for preventive clinical trials: the Predict-HD study.

Authors:  Jane S Paulsen; Michael Hayden; Julie C Stout; Douglas R Langbehn; Elizabeth Aylward; Christopher A Ross; Mark Guttman; Martha Nance; Karl Kieburtz; David Oakes; Ira Shoulson; Elise Kayson; Shannon Johnson; Elizabeth Penziner
Journal:  Arch Neurol       Date:  2006-06

8.  Real-time individual predictions of prostate cancer recurrence using joint models.

Authors:  Jeremy M G Taylor; Yongseok Park; Donna P Ankerst; Cecile Proust-Lima; Scott Williams; Larry Kestin; Kyoungwha Bae; Tom Pickles; Howard Sandler
Journal:  Biometrics       Date:  2013-02-04       Impact factor: 2.571

9.  Detection of Huntington's disease decades before diagnosis: the Predict-HD study.

Authors:  J S Paulsen; D R Langbehn; J C Stout; E Aylward; C A Ross; M Nance; M Guttman; S Johnson; M MacDonald; L J Beglinger; K Duff; E Kayson; K Biglan; I Shoulson; D Oakes; M Hayden
Journal:  J Neurol Neurosurg Psychiatry       Date:  2007-12-20       Impact factor: 10.154

  9 in total
  2 in total

1.  Bayesian joint modelling of longitudinal and time to event data: a methodological review.

Authors:  Maha Alsefri; Maria Sudell; Marta García-Fiñana; Ruwanthi Kolamunnage-Dona
Journal:  BMC Med Res Methodol       Date:  2020-04-26       Impact factor: 4.615

Review 2.  Harnessing repeated measurements of predictor variables for clinical risk prediction: a review of existing methods.

Authors:  Lucy M Bull; Mark Lunt; Glen P Martin; Kimme Hyrich; Jamie C Sergeant
Journal:  Diagn Progn Res       Date:  2020-07-09
  2 in total

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