| Literature DB >> 29959602 |
Michelle Luciano1,2, Alan J Gow3,4, Alison Pattie3,5, Timothy C Bates3,5, Ian J Deary3,5.
Abstract
A number of candidate genes for reading and language impairment have been replicated, primarily in samples of children with developmental disability or delay, although these genes are also supported in adolescent population samples. The present study used a systematic approach to test 14 of these candidate genes for association with reading assessed in late adulthood (two cohorts with mean ages of 70 and 79 years). Gene-sets (14 candidates, axon-guidance and neuron migration pathways) and individual SNPs within each gene of interest were tested for association using imputed data referenced to the 1000 genomes European panel. Using the results from the genome-wide association (GWA) meta-analysis of the two cohorts (N = 1217), a competitive gene-set analysis showed that the candidate gene-set was associated with the reading index (p = .016) at a family wise error rate corrected significance level. Neither axon guidance nor neuron migration pathways were significant. Whereas individual SNP associations within CYP19A1, DYX1C1, CNTNAP2 and DIP2A genes (p < .05) did not reach corrected significance their allelic effects were in the same direction as past available reports. These results suggest that reading skill in normal adults shares the same genetic substrate as reading in adolescents, and clinically disordered reading, and highlights the utility of adult samples to increase sample sizes in the genetic study of developmental disorders.Entities:
Keywords: Axon guidance; Dyslexia; Lothian birth cohort; Neuronal migration; Reading ability
Mesh:
Year: 2018 PMID: 29959602 PMCID: PMC6097729 DOI: 10.1007/s10519-018-9913-3
Source DB: PubMed Journal: Behav Genet ISSN: 0001-8244 Impact factor: 2.805
Gene-based results of 14 reading disability candidate genes tested for association with reading ability in elderly cohorts
| Gene | Chr | Start | Stop | N SNPs | N parameters | N | Zstat | p | Previous association studies of SNPs within gene | ||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Measures | Association* | Null finding | |||||||||
|
| 1 | 35899091 | 36023037 | 18 | 3 | 1217 | 1.574 | 0.058 | Reading disability | Couto et al. ( | |
|
| 2 | 75873909 | 75889334 | 39 | 5 | 1217 | − 0.081 | 0.532 | Dyslexia status; reading disability; reading measures in dyslexic/SLI families | Anthoni et al. ( | Becker et al. ( |
|
| 2 | 75889831 | 75938111 | 88 | 8 | 1217 | − 0.214 | 0.585 | |||
|
| 3 | 78646388 | 79817059 | 1900 | 56 | 1217 | − 1.342 | 0.910 | Dyslexia status; mental calculation in dyslexics; reading disability; reading skill | Mascheretti et al. ( | Matsson et al. ( |
|
| 6 | 24171983 | 24383520 | 580 | 32 | 1217 | − 0.000 | 0.500 | Dyslexia status; discriminant score; reading skill | Chen et al. ( | Newbury et al. ( |
|
| 6 | 24544332 | 24646383 | 231 | 21 | 1217 | − 0.287 | 0.613 | Single word reading; dyslexia status | Cope et al. ( | Brkanac et al. ( |
|
| 7 | 1.46E + 08 | 1.48E + 08 | 6211 | 190 | 1217 | 0.038 | 0.485 | Nonword repetition; nonword reading fluency (x educational time-point); reading measures (in SLI families) | Carrion-Castillo et al. ( | |
|
| 15 | 51500254 | 51630795 | 254 | 18 | 1217 | 1.996 | 0.023 | Dyslexia status; reading skills | Anthoni et al. ( | Matsson et al. ( |
|
| 15 | 55709953 | 55800432 | 236 | 15 | 1217 | 2.384 | 0.009 | Dyslexia; orthographic choice | Bates et al. ( | Bellini et al. ( |
|
| 16 | 81478775 | 81745367 | 844 | 75 | 1217 | 1.091 | 0.138 | Spelling; nonword repetition | Newbury et al. ( | Carrion-Castillo et al. ( |
|
| 21 | 47744036 | 47865682 | 394 | 16 | 1217 | 1.188 | 0.117 | Dyslexia status | Poelmans et al. ( | Matsson et al. ( |
|
| 21 | 47878862 | 47989926 | 343 | 21 | 1217 | 2.049 | 0.020 | Dyslexia status | Poelmans et al. ( | Matsson et al. ( |
|
| 21 | 48018531 | 48025035 | 27 | 7 | 1217 | − 0.032 | 0.513 | Dyslexia status | Matsson et al. ( | |
|
| 21 | 48055507 | 48085155 | 71 | 7 | 1217 | 1.196 | 0.116 | Dyslexia status | Poelmans et al. ( | Matsson et al. ( |
Based on Human Genome Assembly Build 37
*Includes marginal association and inconsistent direction of allelic effect
aPrevious association studies tested intergenic SNPs and haplotypes near MRPL19-GCFC2
bSupported by co-segregation with dyslexia
Fig. 1QQ Plot for dyslexia candidate SNP associations (N = 9225 SNPs) with the reading component