Literature DB >> 29959542

Dynamic behavior and selective adsorption of a methanol/water mixture inside a cyclic peptide nanotube.

Xialan Si1, Jianfen Fan2, Jian Xu1, Xin Zhao1, Lingling Zhang1, Mengnan Qu1.   

Abstract

Present molecular dynamics simulations indicate that the methanol component in a methanol/water mixture is more likely to be trapped in a cyclic peptide nanotube (CPNT), while water molecules tend to be present at the channel mouths as transient guests. Channel water resides mainly between methanol and the CPNT wall, resulting in a distinct decrease in the H-bond number per channel methanol. Six designed CPNTs with different channel diameters and outer surface characteristics all possess distinct selectivity to methanol over water. Of these, the amphipathic 8 × (AQ)4-CPNT exhibits the best performance. Results in this study provide basic information for the application of a CPNT to enrich methanol from a methanol/water mixture. Graphical Abstract Typical overview of water and methanol molecular distribution in cyclic peptide nanotubes.

Entities:  

Keywords:  CPNT; MD simulation; Methanol selective adsorption; Methanol/water mixture

Mesh:

Substances:

Year:  2018        PMID: 29959542     DOI: 10.1007/s00894-018-3712-x

Source DB:  PubMed          Journal:  J Mol Model        ISSN: 0948-5023            Impact factor:   1.810


  24 in total

1.  Variety of the molecular conformation in Peptide nanorings and nanotubes.

Authors:  Hajime Okamoto; Tsutomu Nakanishi; Yukiko Nagai; Maki Kasahara; Kyozaburo Takeda
Journal:  J Am Chem Soc       Date:  2003-03-05       Impact factor: 15.419

2.  Steered molecular dynamics studies of the potential of mean force of a Na+ or K+ ion in a cyclic peptide nanotube.

Authors:  Hyonseok Hwang; George C Schatz; Mark A Ratner
Journal:  J Phys Chem B       Date:  2006-12-28       Impact factor: 2.991

3.  Nanoimmiscibility: Selective absorption of liquid methanol-water mixtures in carbon nanotubes.

Authors:  Yi Liu; Styliani Consta; William A Goddard
Journal:  J Nanosci Nanotechnol       Date:  2010-06

4.  Dynamic behaviors and transport properties of ethanol molecules in transmembrane cyclic peptide nanotubes.

Authors:  Rui Li; Jianfen Fan; Hui Li; Xiliang Yan; Yi Yu
Journal:  J Chem Phys       Date:  2015-07-07       Impact factor: 3.488

5.  Highly selective adsorption of methanol in carbon nanotubes immersed in methanol-water solution.

Authors:  Wen-Hui Zhao; Bo Shang; Sheng-Ping Du; Lan-Feng Yuan; Jinlong Yang; Xiao Cheng Zeng
Journal:  J Chem Phys       Date:  2012-07-21       Impact factor: 3.488

6.  Transport of a liquid water and methanol mixture through carbon nanotubes under a chemical potential gradient.

Authors:  Jie Zheng; Erin M Lennon; Heng-Kwong Tsao; Yu-Jane Sheng; Shaoyi Jiang
Journal:  J Chem Phys       Date:  2005-06-01       Impact factor: 3.488

7.  Studies on the structure and stability of cyclic peptide based nanotubes using oligomeric approach: a computational chemistry investigation.

Authors:  R Vijayaraj; S Sundar Raman; R Mahesh Kumar; V Subramanian
Journal:  J Phys Chem B       Date:  2010-11-18       Impact factor: 2.991

8.  Water diffusion behaviors and transportation properties in transmembrane cyclic hexa-, octa- and decapeptide nanotubes.

Authors:  Jian Liu; Jianfen Fan; Min Tang; Min Cen; Jianfeng Yan; Zhao Liu; Weiqun Zhou
Journal:  J Phys Chem B       Date:  2010-09-30       Impact factor: 2.991

9.  Structure and stability of cyclic peptide based nanotubes: a molecular dynamics study of the influence of amino acid composition.

Authors:  Ramadoss Vijayaraj; Sofie Van Damme; Patrick Bultinck; Venkatesan Subramanian
Journal:  Phys Chem Chem Phys       Date:  2012-10-05       Impact factor: 3.676

10.  Self-diffusion of water and simple alcohols in single-walled aluminosilicate nanotubes.

Authors:  Ji Zang; Suchitra Konduri; Sankar Nair; David S Sholl
Journal:  ACS Nano       Date:  2009-06-23       Impact factor: 15.881

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