Literature DB >> 29957411

Molecular structure, spectroscopic, dielectric and thermal study, nonlinear optical properties, natural bond orbital, HOMO-LUMO and molecular docking analysis of (C6Cl2O4) (C10H14N2F)2·2H2O.

Saadouni Hosna1, Daron E Janzen2, Y Sheena Mary3, K S Resmi3, Renjith Thomas4, Rzaigui Mohamed1, Smirani Wajda5.   

Abstract

A new chloranilate compound with 1-(2-fluorophenyl)piperazine has been synthesized and characterized using spectroscopic methods and X-ray diffraction. The atomic arrangement can be described by an H-bonded 3D network, formed by anionic entities, organic cations and H2O molecules linked together via NH…O, OH…Cl, CH…Cl and CH…O hydrogen bonds. The vibrational absorption bands of the various characteristic groups of this compound have been identified by infrared spectroscopy. Moreover, the thermal and dielectric analyses have shown that the title compound has a phase transition at 393 K. The surface mapped over the dnorm property, highlights the A⋯H (AO, C, Cl and F) as the main intermolecular contacts. On the other hand, the geometry, intermolecular bonds and harmonic vibrational frequencies of the title molecule have been investigated using the B3LYP/6-31G (d, p) method. The stability of the structure obtained, as well as the charge transfer within the molecule, have been confirmed by determining the energies of the HOMO and LUMO levels and the theoretical gap energy. Molecular docking studies of the title compound have also been conducted as part of this study.
Copyright © 2018. Published by Elsevier B.V.

Entities:  

Keywords:  Chloranilate; Crystal structure; DFT; HOMO-LUMO; Vibrational spectra

Year:  2018        PMID: 29957411     DOI: 10.1016/j.saa.2018.06.062

Source DB:  PubMed          Journal:  Spectrochim Acta A Mol Biomol Spectrosc        ISSN: 1386-1425            Impact factor:   4.098


  3 in total

1.  Detailed quantum mechanical, molecular docking, QSAR prediction, photovoltaic light harvesting efficiency analysis of benzil and its halogenated analogues.

Authors:  Y Shyma Mary; Y Sheena Mary; K S Resmi; Veena S Kumar; Renjith Thomas; B Sureshkumar
Journal:  Heliyon       Date:  2019-11-14

2.  Energy and reactivity profile and proton affinity analysis of rimegepant with special reference to its potential activity against SARS-CoV-2 virus proteins using molecular dynamics.

Authors:  T Pooventhiran; Ephraim Felix Marondedze; Penny Poomani Govender; Utsab Bhattacharyya; D Jagadeeswara Rao; Elham S Aazam; Jinesh M Kuthanapillil; Tomlal Jose E; Renjith Thomas
Journal:  J Mol Model       Date:  2021-09-04       Impact factor: 1.810

3.  Modelling the structural and reactivity landscapes of tucatinib with special reference to its wavefunction-dependent properties and screening for potential antiviral activity.

Authors:  Ali Alsalme; T Pooventhiran; Nabil Al-Zaqri; D Jagadeeswara Rao; Siriki Srinivasa Rao; Renjith Thomas
Journal:  J Mol Model       Date:  2020-11-16       Impact factor: 1.810

  3 in total

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