Literature DB >> 29956327

Decoding the gene coexpression network underlying the ability of Gevuina avellana to live in diverse light conditions.

Enrique Ostria-Gallardo1,2, Aashish Ranjan3, Yasunori Ichihashi4,5, Luis J Corcuera6, Neelima R Sinha7.   

Abstract

Gevuina avellana (Proteaceae) is a typical tree from the South American temperate rainforest. Although this species mostly regenerates in shaded understories, it exhibits an exceptional ecological breadth, being able to live under a wide range of light conditions. Here we studied the genetic basis that underlies physiological acclimation of the photosynthetic responses of G. avellana under contrasting light conditions. We analyzed carbon assimilation and light energy used for photochemical processes in plants acclimated to contrasting light conditions. Also, we used a transcriptional profile of leaf primordia from G. avellana saplings growing under different light environments in their natural habitat, to identify the gene coexpression network underpinning photosynthetic performance and light-related processes. The photosynthetic parameters revealed optimal performance regardless of light conditions. Strikingly, the mechanism involved in dissipation of excess light energy showed no significant differences between high- and low-light-acclimated plants. The gene coexpression network defined a community structure consistent with the photochemical responses, including genes involved mainly in assembly and functioning of photosystems, photoprotection, and retrograde signaling. This ecophysiological genomics approach improves our understanding of the intraspecific variability that allows G. avellana to have optimal photochemical and photoprotective mechanisms in the diverse light habitats it encounters in nature.
© 2018 The Authors. New Phytologist © 2018 New Phytologist Trust.

Entities:  

Keywords:  zzm321990Gevuina avellanazzm321990; gene coexpression network; light acclimation; photosynthesis; temperate rainforest

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Substances:

Year:  2018        PMID: 29956327     DOI: 10.1111/nph.15278

Source DB:  PubMed          Journal:  New Phytol        ISSN: 0028-646X            Impact factor:   10.151


  2 in total

1.  A comparative gene co-expression analysis using self-organizing maps on two congener filmy ferns identifies specific desiccation tolerance mechanisms associated to their microhabitat preference.

Authors:  Enrique Ostria-Gallardo; Giovanni Larama; Graciela Berríos; Ana Fallard; Ana Gutiérrez-Moraga; Ingo Ensminger; León A Bravo
Journal:  BMC Plant Biol       Date:  2020-02-04       Impact factor: 4.215

2.  Leaf shape is a predictor of fruit quality and cultivar performance in tomato.

Authors:  Steven D Rowland; Kristina Zumstein; Hokuto Nakayama; Zizhang Cheng; Amber M Flores; Daniel H Chitwood; Julin N Maloof; Neelima R Sinha
Journal:  New Phytol       Date:  2020-02-11       Impact factor: 10.151

  2 in total

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