Literature DB >> 29956230

Supported Lipid Bilayers for Atomic Force Microscopy Studies.

Zhengjian Lv1,2, Siddhartha Banerjee1, Karen Zagorski1, Yuri L Lyubchenko3.   

Abstract

Nanoimaging methods, atomic force microscopy (AFM) in particular, are widely used to study the interaction of biological molecules with the supported lipid bilayer (SLB), which itself is a traditional model for cellular membranes. Success in these studies is based on the availability of a stable SLB for the required observation period, which can extend several hours. The application of AFM requires that the SLB have a smooth morphology, thus enabling visualization of proteins and other molecules on its surface. Herein, we describe protocols for SLB assembly by using 1-palmitoyl-2-oleoyl-sn-glycero-3-phosphocholine (POPC) and 1-palmitoyl-2-oleoyl-sn-glycero-3-phospho-L-serine (POPS) on a mica support. Our methodology enables us to assemble defect-free POPC and POPS SLBs that remain stable for at least 8 h. The application of such smooth and stable surfaces is illustrated by monitoring of the on-surface aggregation of amyloid proteins with the use of time-lapse AFM.

Entities:  

Keywords:  Amyloid aggregation; Atomic force microscope; Nanoimaging; Supported lipid bilayer; Time-lapse imaging

Mesh:

Substances:

Year:  2018        PMID: 29956230      PMCID: PMC6045422          DOI: 10.1007/978-1-4939-8591-3_8

Source DB:  PubMed          Journal:  Methods Mol Biol        ISSN: 1064-3745


  12 in total

1.  Cell membranes: the lipid perspective.

Authors:  Unal Coskun; Kai Simons
Journal:  Structure       Date:  2011-11-09       Impact factor: 5.006

Review 2.  Biophysics of α-synuclein membrane interactions.

Authors:  Candace M Pfefferkorn; Zhiping Jiang; Jennifer C Lee
Journal:  Biochim Biophys Acta       Date:  2011-07-28

Review 3.  Lipid rafts and signal transduction.

Authors:  K Simons; D Toomre
Journal:  Nat Rev Mol Cell Biol       Date:  2000-10       Impact factor: 94.444

4.  Mica functionalization for imaging of DNA and protein-DNA complexes with atomic force microscopy.

Authors:  Luda S Shlyakhtenko; Alexander A Gall; Yuri L Lyubchenko
Journal:  Methods Mol Biol       Date:  2013

5.  Formation of solid-supported lipid bilayers: an integrated view.

Authors:  Ralf P Richter; Rémi Bérat; Alain R Brisson
Journal:  Langmuir       Date:  2006-04-11       Impact factor: 3.882

6.  AFM for analysis of structure and dynamics of DNA and protein-DNA complexes.

Authors:  Yuri L Lyubchenko; Luda S Shlyakhtenko
Journal:  Methods       Date:  2008-10-07       Impact factor: 3.608

7.  Phospholipid/alkanethiol bilayers for cell-surface receptor studies by surface plasmon resonance.

Authors:  A L Plant; M Brigham-Burke; E C Petrella; D J O'Shannessy
Journal:  Anal Biochem       Date:  1995-04-10       Impact factor: 3.365

8.  Lipid organization of the plasma membrane.

Authors:  Helgi I Ingólfsson; Manuel N Melo; Floris J van Eerden; Clément Arnarez; Cesar A Lopez; Tsjerk A Wassenaar; Xavier Periole; Alex H de Vries; D Peter Tieleman; Siewert J Marrink
Journal:  J Am Chem Soc       Date:  2014-10-01       Impact factor: 15.419

Review 9.  The Fluid-Mosaic Model of Membrane Structure: still relevant to understanding the structure, function and dynamics of biological membranes after more than 40 years.

Authors:  Garth L Nicolson
Journal:  Biochim Biophys Acta       Date:  2013-11-01

10.  Liposome: classification, preparation, and applications.

Authors:  Abolfazl Akbarzadeh; Rogaie Rezaei-Sadabady; Soodabeh Davaran; Sang Woo Joo; Nosratollah Zarghami; Younes Hanifehpour; Mohammad Samiei; Mohammad Kouhi; Kazem Nejati-Koshki
Journal:  Nanoscale Res Lett       Date:  2013-02-22       Impact factor: 4.703

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  12 in total

1.  Assembly of α-synuclein aggregates on phospholipid bilayers.

Authors:  Zhengjian Lv; Mohtadin Hashemi; Siddhartha Banerjee; Karen Zagorski; Jean-Christophe Rochet; Yuri L Lyubchenko
Journal:  Biochim Biophys Acta Proteins Proteom       Date:  2019-06-19       Impact factor: 3.036

2.  Characterization of the Lipid Structure and Fluidity of Lipid Membranes on Epitaxial Graphene and Their Correlation to Graphene Features.

Authors:  Megan Farell; Maxwell Wetherington; Manish Shankla; Inseok Chae; Shruti Subramanian; Seong H Kim; Aleksei Aksimentiev; Joshua Robinson; Manish Kumar
Journal:  Langmuir       Date:  2019-03-18       Impact factor: 3.882

3.  Interaction of Amyloidogenic Proteins with Membranes and Molecular Mechanism for the Development of Alzheimer's disease.

Authors:  S Banerjee; Y L Lyubchenko
Journal:  Alzheimers Res Ther Open Access       Date:  2019-06-06

4.  Amyloid B-Protein Aggregation at Physiologically Relevant Concentrations. A Critical Role of Membranes.

Authors:  Y L Lyubchenko
Journal:  Alzheimers Res Ther Open Access       Date:  2020-10-28

5.  Topographically smooth and stable supported lipid bilayer for high-resolution AFM studies.

Authors:  Siddhartha Banerjee; Yuri L Lyubchenko
Journal:  Methods       Date:  2021-02-18       Impact factor: 3.608

6.  Mechanical properties of the high cholesterol-containing membrane: An AFM study.

Authors:  Nawal K Khadka; Raju Timsina; Erica Rowe; Matthew O'Dell; Laxman Mainali
Journal:  Biochim Biophys Acta Biomembr       Date:  2021-04-20       Impact factor: 4.019

7.  A Novel Aβ40 Assembly at Physiological Concentration.

Authors:  Bogachan Tahirbegi; Alastair J Magness; Maria Elena Piersimoni; Thomas Knöpfel; Keith R Willison; David R Klug; Liming Ying
Journal:  Sci Rep       Date:  2020-06-11       Impact factor: 4.379

8.  Free Cholesterol Accelerates Aβ Self-Assembly on Membranes at Physiological Concentration.

Authors:  Mohtadin Hashemi; Siddhartha Banerjee; Yuri L Lyubchenko
Journal:  Int J Mol Sci       Date:  2022-03-03       Impact factor: 5.923

9.  Characterize the Interaction of the DNA Helicase PriA with the Stalled DNA Replication Fork Using Atomic Force Microscopy.

Authors:  Yaqing Wang; Zhiqiang Sun; Piero R Bianco; Yuri L Lyubchenko
Journal:  Bio Protoc       Date:  2021-03-05

10.  Interaction of Aβ42 with Membranes Triggers the Self-Assembly into Oligomers.

Authors:  Siddhartha Banerjee; Mohtadin Hashemi; Karen Zagorski; Yuri L Lyubchenko
Journal:  Int J Mol Sci       Date:  2020-02-08       Impact factor: 5.923

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