| Literature DB >> 29951533 |
Qian Zhang1, Xinhua Xiao1, Jia Zheng1, Ming Li1, Miao Yu1, Fan Ping1, Tong Wang1, Xiaojing Wang1.
Abstract
The collected data have revealed the beneficial effects of dipeptidyl peptidase-4 (DPP-4) inhibitors on the vascular endothelium, including vildagliptin. However, the involved mechanisms are not yet clear. In this study, Sprague-Dawley rats were randomly divided into the following four groups: control, diabetic, diabetic + low-dose vildagliptin (10 mg/kg/d), and diabetic + high-dose vildagliptin (20 mg/kg/d). The diabetic model was created by feeding a high-fat diet for four weeks and injection of streptozotocin. Then, vildagliptin groups were given oral vildagliptin for twelve weeks, and the control and diabetic groups were given the same volume of saline. The metabolic parameters, endothelial function, and whole genome expression in the aorta were examined. After 12 weeks of treatment, vildagliptin groups showed significantly reduced blood glucose, blood total cholesterol, and attenuated endothelial dysfunction. Notably, vildagliptin may inhibit angiopoietin-like 3 (Angptl3) and betaine-homocysteine S-methyltransferase (Bhmt) expression and activated paraoxonase-1 (Pon1) in the aorta of diabetic rats. These findings may demonstrate the vasoprotective pathway of vildagliptin in vivo.Entities:
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Year: 2018 PMID: 29951533 PMCID: PMC5989281 DOI: 10.1155/2018/3109251
Source DB: PubMed Journal: Biomed Res Int Impact factor: 3.411
Oligonucleotide sequences for qPCR analysis.
| Gene symbol | GenBank ID | Forward primer | Reverse Primer | Product size |
|---|---|---|---|---|
|
| NM_001025065 | AAAGGGTTTTGGGAGGCTTGA | CCCAAAAGCGCTATGGTCTC | 117 |
|
| NM_030850 | GATGCTTGGGGAGTGACGAA | TGTGGCTACTGTGCGGATTT | 119 |
|
| NM_032077 | AAGCTGGCTACACCCACATC | CAACATTCGTTGGTGAGCGG | 103 |
Angptl3: angiopoietin-like 3; Bhmt: betaine-homocysteine S-methyltransferase; Pon1: paraoxonase 1.
Figure 1Effect of vildagliptin on metabolic parameters in rats. (a) Body weight, (b) fasting blood glucose, (c) insulin, (d) homeostasis model assessment (HOMA-IR), (e) blood glucose in oral glucose tolerance test (OGTT), (f) area under the curve (AUC) in OGTT, (g) total cholesterol, (h) triglyceride, (i) high-density lipoprotein cholesterol (HDL-C), (j) low-density lipoprotein cholesterol (LDL-C), and (k) relaxation responses to Ach in aortic rings. Values are mean ± SD (n = 6), P < 0.05, P < 0.01, versus control group; #P < 0.05, ##P < 0.01 versus diabetic group. vil-low: low dose of vildagliptin; vil-high: high dose of vildagliptin.
The enriched GO terms with differentially expressed genes (P < 0.05).
| Term ID | Term name | Count |
| Fold Enrichment | catalogue | Genes |
|---|---|---|---|---|---|---|
| GO:0010951 | negative regulation of endopeptidase activity | 16 | 7.22 × 10−10 | 8.425 | Biology Process | KNG1, MUG2, MUG1, SERPINA10, PZP, C5, AHSG, AMBP, SERPINA3N, SERPINF2, SERPINA4, SERPINC1, ITIH4, HRG, ITIH2, SERPIND1 |
| GO:0019373 | epoxygenase P450 pathway | 7 | 5.88 × 10−7 | 21.821 | Biology Process | CYP2C6V1, CYP2B3, CYP2J4, CYP2C23, CYP2C13, CYP2A1, CYP2A2 |
| GO:0006953 | acute-phase response | 7 | 7.97 × 10−6 | 14.356 | Biology Process | KNG1, MUG1, CRP, ITIH4, SAA4, SERPINA1, AHSG |
| GO:0007596 | blood coagulation | 8 | 2.08 × 10−5 | 9.446 | Biology Process | F13B, F12, SERPINA10, C9, F9, SERPIND1, CPB2, PLG |
| GO:0055114 | oxidation-reduction process | 23 | 3.29 × 10−5 | 2.753 | Biology Process | ALDH8A1, CYP2B3, CYP2J4, HSD3B5, DECR2, RGD1304810, CYP2D3, EGLN1, KMO, P4HTM, VAT1, IYD, CYP2C6V1, TDO2, CYP3A23/3A1, HIF1AN, CYP4F4, CYP2C23, CYP2C13, SH3BGRL3, RDH16, CYP2A1, CYP2A2 |
| GO:0007010 | cytoskeleton organization | 10 | 3.95 × 10−5 | 6.089 | Biology Process | CCL24, TNIK, CAP2, TUBB2A, SVIL, CAMSAP1, STRIP2, TUBB6, TUBA1A, TUBB4B |
| GO:0051918 | negative regulation of fibrinolysis | 4 | 6.93 × 10−5 | 44.533 | Biology Process | SERPINF2, HRG, CPB2, PLG |
| GO:0007017 | microtubule-based process | 6 | 1.68 × 10−4 | 11.405 | Biology Process | TUBB2A, TUBB5, TUBB6, TUBA1A, DCTN1, TUBB4B |
| GO:0046470 | phosphatidylcholine metabolic process | 4 | 6.75 × 10−4 | 22.267 | Biology Process | APOA5, PON1, GPLD1, LIPC |
| GO:0042730 | fibrinolysis | 4 | 8.35 × 10−4 | 20.782 | Biology Process | F12, HRG, CPB2, PLG |
| GO:0031100 | organ regeneration | 7 | 0.00110 | 5.995 | Biology Process | APOA2, BAAT, ADH1, ALDOC, APOA5, PRPS2, AHSG |
| GO:0006958 | complement activation, classical pathway | 5 | 0.00123 | 10.532 | Biology Process | C9, C5, CRP, C4BPB, C4BPA |
| GO:0006954 | inflammatory response | 12 | 0.00158 | 3.149 | Biology Process | CCL24, KNG1, TLR10, SERPINA3N, TNFRSF10B, MUG1, CCL21, C5, HRH4, CCL9, SERPINA1, CXCR3 |
| GO:0050996 | positive regulation of lipid catabolic process | 3 | 0.00236 | 38.967 | Biology Process | APOA2, APOA5, ANGPTL3 |
| GO:0070328 | triglyceride homeostasis | 4 | 0.00431 | 11.990 | Biology Process | APOC4, APOA5, LIPC, ANGPTL3 |
| GO:0007568 | aging | 11 | 0.00745 | 2.721 | Biology Process | ADRB3, CYP3A23/3A1, CRYAB, ENDOG, ALDOC, CRP, SPINK1, IGFBP1, ATP5G3, SREBF2, HTR2A |
| GO:0071346 | cellular response to interferon-gamma | 5 | 0.00766 | 6.388 | Biology Process | CCL24, SERPINA3N, CCL21, CCL9, CFH |
| GO:0008203 | cholesterol metabolic process | 5 | 0.00811 | 6.285 | Biology Process | APOA2, PON1, LIPC, ANGPTL3, SREBF2 |
| GO:0042632 | cholesterol homeostasis | 5 | 0.00906 | 6.089 | Biology Process | CAV3, APOA2, APOA5, LIPC, ANGPTL3 |
| GO:0042246 | tissue regeneration | 4 | 0.00996 | 8.907 | Biology Process | SERPINA10, APOA5, IGFBP1, PLG |
| GO:0046330 | positive regulation of JNK cascade | 5 | 0.0112 | 5.730 | Biology Process | DIXDC1, CCL21, SERPINF2, MAP3K10, TPD52L1 |
| GO:0050921 | positive regulation of chemotaxis | 3 | 0.0134 | 16.700 | Biology Process | CCL21, C5, CXCR3 |
| GO:0006956 | complement activation | 3 | 0.0153 | 15.587 | Biology Process | C8A, C5, CFH |
| GO:2000649 | regulation of sodium ion transmembrane transporter activity | 3 | 0.0153 | 15.587 | Biology Process | CAV3, SCN1B, SCN2B |
| GO:0042573 | retinoic acid metabolic process | 3 | 0.0173 | 14.613 | Biology Process | ALDH8A1, ADH1, RDH16 |
| GO:0009395 | phospholipid catabolic process | 3 | 0.0217 | 12.989 | Biology Process | APOA2, ENPP2, ANGPTL3 |
| GO:0001666 | response to hypoxia | 9 | 0.0230 | 2.598 | Biology Process | CRYAB, ANG, CAMK2G, ALDOC, CRP, SERPINA1, EGLN1, PAK1, LIPC |
| GO:0055117 | regulation of cardiac muscle contraction | 3 | 0.0241 | 12.305 | Biology Process | CAV3, P2RX4, CALM3 |
| GO:0055090 | acylglycerol homeostasis | 2 | 0.0254 | 77.933 | Biology Process | APOA5, ANGPTL3 |
| GO:0034370 | triglyceride-rich lipoprotein particle remodeling | 2 | 0.0254 | 77.933 | Biology Process | APOA2, APOA5 |
| GO:0031116 | positive regulation of microtubule polymerization | 3 | 0.0265 | 11.690 | Biology Process | CAV3, MAP1B, DCTN1 |
| GO:0032956 | regulation of actin cytoskeleton organization | 4 | 0.0287 | 5.995 | Biology Process | DIXDC1, HRG, PAK1, SH3BGRL3 |
| GO:0048247 | lymphocyte chemotaxis | 3 | 0.0317 | 10.627 | Biology Process | CCL24, CCL21, CCL9 |
| GO:0070098 | chemokine-mediated signaling pathway | 4 | 0.0363 | 5.469 | Biology Process | CCL24, CCL21, CCL9, CXCR3 |
| GO:0045959 | negative regulation of complement activation, classical pathway | 2 | 0.0378 | 51.956 | Biology Process | C4BPB, C4BPA |
| GO:0002542 | Factor XII activation | 2 | 0.0378 | 51.956 | Biology Process | KNG1, F12 |
| GO:0009725 | response to hormone | 5 | 0.0381 | 3.936 | Biology Process | ANG, APOA5, LIPC, ANGPTL3, SREBF2 |
| GO:0042311 | vasodilation | 3 | 0.0402 | 9.352 | Biology Process | KNG1, P2RX4, ALB |
| GO:0006631 | fatty acid metabolic process | 4 | 0.0413 | 5.196 | Biology Process | BAAT, DECR2, LIPC, ANGPTL3 |
| GO:0007399 | nervous system development | 7 | 0.0428 | 2.741 | Biology Process | PLXNA4, SCN2B, CAMK2G, KREMEN1, MAP1B, DPYSL3, NUMBL |
| GO:0048675 | axon extension | 3 | 0.0431 | 8.992 | Biology Process | SEMA7A, MAP1B, POU4F3 |
| GO:0072659 | protein localization to plasma membrane | 4 | 0.0485 | 4.871 | Biology Process | CAV3, TNIK, FGF13, CDH1 |
| GO:0006935 | chemotaxis | 4 | 0.0485 | 4.871 | Biology Process | CCL24, ENPP2, C5, CXCR3 |
| GO:0006810 | transport | 6 | 0.0489 | 3.017 | Biology Process | P2RX4, DYNC1LI1, AFM, LOC360919, ALB, LOC500473 |
| GO:0072562 | blood microparticle | 22 | 1.84 × 10−18 | 14.631 | Cellular Components | KNG1, GC, C9, MUG1, APCS, C4BPA, PLG, AHSG, C8A, AMBP, APOA2, AFM, SERPINF2, ALB, HPX, APOA5, PON1, CFH, SERPINC1, ITIH4, HRG, ITIH2 |
| GO:0005615 | extracellular space | 49 | 2.19 × 10−11 | 2.922 | Cellular Components | MUG2, MUG1, PZP, CRP, GPLD1, SPINK1, ANPEP, AZGP1, APOA2, ANG, SEMA7A, SERPINA4, APOA5, CFH, SERPINA1, SEMA3B, KNG1, F12, APCS, LOC360919, F9, C8A, AMBP, SERPINA3N, SERPINF2, SCGB2A2, GC, SERPINA10, ENPP2, C5, CCL9, AHSG, CCL24, ALB, CCL21, SERPINC1, ANGPTL3, C4BPB, DPYSL3, C4BPA, PLG, AFM, HPX, PON1, METRNL, SERPIND1, IGFBP1, LIPC, CPB2 |
| GO:0034364 | high-density lipoprotein particle | 7 | 4.31 × 10−8 | 32.313 | Cellular Components | APOA2, APOC4, APOA5, PON1, GPLD1, SAA4, LIPC |
| GO:0070062 | extracellular exosome | 66 | 6.06 × 10−8 | 1.957 | Cellular Components | ALDH8A1, CYP2J4, MUG1, TUBB2A, CRP, GPLD1, ANPEP, CKB, AZGP1, APOA2, DES, PACSIN3, ANG, SERPINA4, ITIH4, TUBB5, CFH, TUBB6, ITIH2, SEMA3B, SERPINA1, TUBA1A, KNG1, F12, TNIK, APCS, CRYAB, F9, METTL7A, VAT1, AMBP, C8A, RPS16, SERPINF2, BHMT, PRNP, SLC27A2, PRPS2, GC, C9, SERPINA10, ALDOC, C5, CDH1, KMO, AHSG, ALCAM, ALB, SERPINC1, DOPEY2, HRG, TUBB4B, COTL1, PLG, P2RX4, AFM, HPX, ARF3, PON1, CALM3, PAPPA2, METRNL, SERPIND1, SH3BGRL3, MYH14, CPB2 |
| GO:0031090 | organelle membrane | 11 | 2.10 × 10−7 | 9.591 | Cellular Components | CYP2C6V1, CYP2B3, UGT2B37, UGT2B17, CYP3A23/3A1, CYP4F4, CYP2C23, CYP2D3, CYP2C13, CYP2A1, CYP2A2 |
| GO:0030018 | Z disc | 9 | 1.24 × 10−4 | 6.037 | Cellular Components | CAV3, JPH2, DES, CRYAB, BAG3, PDLIM3, PAK1, HOMER1, FLNC |
| GO:0014704 | intercalated disc | 6 | 4.60 × 10−4 | 9.232 | Cellular Components | CAV3, SCN1B, DES, ATP2A2, FGF13, PAK1 |
| GO:0030426 | growth cone | 9 | 6.13 × 10−4 | 4.772 | Cellular Components | ANG, CRP, MAP1B, CALM3, DPYSL3, FGF13, MYH14, PAK1, HAP1 |
| GO:0005874 | microtubule | 11 | 8.97 × 10−4 | 3.658 | Cellular Components | DYNC1LI1, TUBB2A, CAMSAP1, MAP1B, TUBB5, TUBB6, FGF13, TUBA1A, DCTN1, TUBB4B, GLYATL2 |
| GO:0043034 | costamere | 4 | 0.00196 | 15.695 | Cellular Components | SVIL, SYNM, HOMER1, FLNC |
| GO:0005576 | extracellular region | 19 | 0.00456 | 2.088 | Cellular Components | APCS, C9, CRP, NTN4, GPLD1, SAA4, C4BPB, FGF13, PTH2, C4BPA, PLG, LOC500473, CCL24, C8A, SERPINA3N, ALB, APOA5, HRG, LIPC |
| GO:0005789 | endoplasmic reticulum membrane | 16 | 0.00504 | 2.258 | Cellular Components | CYP2B3, CDIPT, HSD3B5, CYP2D3, SREBF2, CYP2C6V1, UGT2B37, UGT2B17, CYP3A23/3A1, ATP2A2, CYP4F4, CYP2C23, CYP2C13, CYP2A1, CYP2A2, SLC27A2 |
| GO:0030424 | axon | 12 | 0.00657 | 2.609 | Cellular Components | GC, ALCAM, P2RX4, CRYAB, ALDOC, MAP1B, FGF13, CDH1, MYH14, PAK1, HOMER1, HTR2A |
| GO:0034361 | very-low-density lipoprotein particle | 3 | 0.0192 | 13.848 | Cellular Components | APOA2, APOC4, APOA5 |
| GO:0043231 | intracellular membrane-bounded organelle | 16 | 0.0302 | 1.825 | Cellular Components | KNG1, CYP2B3, CAV3, CYP2J4, HSD3B5, GPLD1, PLG, SREBF2, AMBP, UGT2B17, CYP3A23/3A1, PON1, CYP2C23, UGT2A3, CYP2A1, SLC27A2 |
| GO:0005856 | cytoskeleton | 8 | 0.0345 | 2.605 | Cellular Components | TNIK, DES, FILIP1, MAP1B, FLNC, COTL1, TPM2, HAP1 |
| GO:0044216 | other organism cell | 2 | 0.0376 | 52.316 | Cellular Components | C4BPB, C4BPA |
| GO:0033017 | sarcoplasmic reticulum membrane | 3 | 0.0457 | 8.719 | Cellular Components | JPH2, ATP2A2, CAMK2G |
| GO:0004867 | serine-type endopeptidase inhibitor activity | 15 | 6.34 × 10−11 | 11.167 | Molecular Function | MUG2, PZP, MUG1, SERPINA10, SPINK1, AMBP, SERPINA3N, SERPINF2, SERPINA4, SERPINC1, ITIH4, HRG, ITIH2, SERPINA1, SERPIND1 |
| GO:0070330 | aromatase activity | 9 | 2.65 × 10−8 | 18.039 | Molecular Function | CYP2C6V1, CYP2B3, CYP3A23/3A1, CYP4F4, CYP2C23, CYP2D3, CYP2C13, CYP2A1, CYP2A2 |
| GO:0008392 | arachidonic acid epoxygenase activity | 8 | 1.97 × 10−7 | 18.393 | Molecular Function | CYP2C6V1, CYP2B3, CYP2J4, CYP2C23, CYP2D3, CYP2C13, CYP2A1, CYP2A2 |
| GO:0008395 | steroid hydroxylase activity | 8 | 5.35 × 10−7 | 16.035 | Molecular Function | CYP2C6V1, CYP2B3, CYP2J4, CYP2C23, CYP2D3, CYP2C13, CYP2A1, CYP2A2 |
| GO:0020037 | heme binding | 13 | 1.46 × 10−6 | 6.122 | Molecular Function | CYP2B3, CYP2J4, CYP2D3, AMBP, CYP2C6V1, TDO2, CYP3A23/3A1, CYP4F4, CYP2C23, HRG, CYP2C13, CYP2A1, CYP2A2 |
| GO:0008092 | cytoskeletal protein binding | 8 | 1.07 × 10−5 | 10.423 | Molecular Function | DES, PACSIN3, CRYAB, ALDOC, PDLIM3, CDH1, FLNC, ABCG2 |
| GO:0005506 | iron ion binding | 13 | 1.11 × 10−5 | 5.031 | Molecular Function | CYP2B3, CYP2J4, CYP2D3, EGLN1, P4HTM, CYP2C6V1, CYP3A23/3A1, HIF1AN, CYP4F4, CYP2C23, CYP2C13, CYP2A1, CYP2A2 |
| GO:0004866 | endopeptidase inhibitor activity | 5 | 5.40 × 10−4 | 13.028 | Molecular Function | MUG2, MUG1, C5, SERPINA1, AHSG |
| GO:0017080 | sodium channel regulator activity | 5 | 6.95 × 10−4 | 12.214 | Molecular Function | CAV3, SCN1B, SCN2B, GPLD1, FGF13 |
| GO:0016712 | oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen | 5 | 8.78 × 10−4 | 11.495 | Molecular Function | CYP2B3, CYP2J4, CYP3A23/3A1, CYP2D3, CYP2A1 |
| GO:0005200 | structural constituent of cytoskeleton | 6 | 0.00223 | 6.514 | Molecular Function | TUBB2A, TUBB5, TUBB6, SYNM, TUBA1A, TUBB4B |
| GO:0016706 | oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors | 4 | 0.00262 | 14.213 | Molecular Function | HIF1AN, RGD1304810, EGLN1, P4HTM |
| GO:0008201 | heparin binding | 8 | 0.00268 | 4.283 | Molecular Function | SERPINA10, ANG, APOA5, SERPINC1, CFH, HRG, SERPIND1, LIPC |
| GO:0016705 | oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | 5 | 0.00297 | 8.316 | Molecular Function | CYP2C6V1, CYP2B3, CYP2C23, EGLN1, CYP2C13 |
| GO:0005102 | receptor binding | 12 | 0.00666 | 2.598 | Molecular Function | KNG1, HAO1, P2RX4, BAAT, ANG, LRRC4B, DECR2, HRG, HOMER1, SLC27A2, HAP1, PLG |
| GO:0004497 | monooxygenase activity | 5 | 0.00944 | 6.013 | Molecular Function | CYP2C6V1, CYP2B3, CYP2C23, CYP2D3, CYP2C13 |
| GO:0004622 | lysophospholipase activity | 3 | 0.01328 | 16.751 | Molecular Function | ENPP2, LIPC, GDPD1 |
| GO:0042803 | protein homodimerization activity | 19 | 0.01474 | 1.845 | Molecular Function | RBPMS2, CRYAB, GIMAP7, CAMK2G, CRP, NR4A1, TPD52L1, ABCG2, AMBP, ADRB3, APOA2, HIF1AN, ANG, SERPINF2, ADH1, TENM3, PON1, RDH16, PRPS2 |
| GO:0005543 | phospholipid binding | 5 | 0.0198 | 4.825 | Molecular Function | APOA2, APOA5, MAP1B, PON1, SYTL3 |
| GO:0044325 | ion channel binding | 6 | 0.0233 | 3.693 | Molecular Function | CAV3, CALM3, FGF13, PRNP, HOMER1, HAP1 |
| GO:0048020 | CCR chemokine receptor binding | 3 | 0.0239 | 12.342 | Molecular Function | CCL24, CCL21, CCL9 |
| GO:0043395 | heparan sulfate proteoglycan binding | 3 | 0.0289 | 11.167 | Molecular Function | CFH, HRG, LIPC |
| GO:0030215 | semaphorin receptor binding | 3 | 0.0289 | 11.167 | Molecular Function | SEMA7A, SEMA3B, SH3BGRL3 |
| GO:0005509 | calcium ion binding | 16 | 0.0330 | 1.797 | Molecular Function | MATN2, F12, APCS, CALR4, TBC1D9, ENPP2, CRP, DECR2, F9, CDH1, P4HTM, ATP2A2, PON1, ITIH4, CALM3, SYTL3 |
| GO:0008307 | structural constituent of muscle | 3 | 0.0371 | 9.771 | Molecular Function | PDLIM3, SYNM, TPM2 |
| GO:0003779 | actin binding | 8 | 0.0406 | 2.511 | Molecular Function | GC, DIXDC1, CAP2, ANG, DIAPH3, MAP1B, COTL1, TPM2 |
| GO:0015020 | glucuronosyltransferase activity | 3 | 0.0460 | 8.685 | Molecular Function | UGT2B37, UGT2B17, UGT2A3 |
| GO:0005507 | copper ion binding | 4 | 0.0463 | 4.963 | Molecular Function | P2RX4, ANG, PRNP, ATP7B |
| GO:0005515 | protein binding | 29 | 0.0484 | 1.427 | Molecular Function | CAV3, GC, SCN1B, ALDOC, CRP, CDH1, RHOV, CKB, A1CF, TUBB5, SERPINC1, SERPINA1, PAK1, TUBA1A, HAP1, TUBB4B, SCN2B, CRYAB, MAP1B, HRK, NR4A1, HOMER1, NUMBL, P2RX4, ATP2A2, CALM3, SLC27A2, PRPS2, HTR2A |
Figure 2Enriched biological process for the differentially expressed genes between vil-high group and diabetic group.
The enriched Kegg pathway with differentially expressed genes (P < 0.05).
| Pathway ID | Pathway name | Count |
| Fold Enrichment | Genes |
|---|---|---|---|---|---|
| rno04610 | Complement and coagulation cascades | 16 | 7.92 × 10−14 | 14.904 | KNG1, F12, C9, C5, F9, C4BPB, C4BPA, PLG, F13B, C8A, SERPINF2, CFH, SERPINC1, SERPINA1, SERPIND1, CPB2 |
| rno00830 | Retinol metabolism | 12 | 3.00 × 10−8 | 9.697 | CYP2C6V1, CYP2B3, UGT2B37, UGT2B17, CYP3A23/3A1, ADH1, CYP2C23, CYP2C13, UGT2A3, CYP2A1, RDH16, CYP2A2 |
| rno00140 | Steroid hormone biosynthesis | 10 | 2.63 × 10−6 | 8.280 | CYP2C6V1, CYP2B3, UGT2B37, UGT2B17, CYP3A23/3A1, HSD3B5, CYP2C23, CYP2D3, CYP2C13, UGT2A3 |
| rno05204 | Chemical carcinogenesis | 9 | 5.47 × 10−5 | 6.633 | CYP2C6V1, CYP2B3, UGT2B37, UGT2B17, CYP3A23/3A1, ADH1, CYP2C23, CYP2C13, UGT2A3 |
| rno00591 | Linoleic acid metabolism | 5 | 3.01 × 10−3 | 8.179 | CYP2C6V1, CYP2J4, CYP3A23/3A1, CYP2C23, CYP2C13 |
| rno04750 | Inflammatory mediator regulation of TRP channels | 7 | 6.98 × 10−3 | 4.082 | CYP2C6V1, CYP2J4, CAMK2G, CYP2C23, CALM3, CYP2C13, HTR2A |
| rno04540 | Gap junction | 6 | 9.57 × 10−3 | 4.573 | TUBB2A, TUBB5, TUBB6, TUBA1A, TUBB4B, HTR2A |
| rno05020 | Prion diseases | 4 | 1.14 × 10−2 | 8.384 | C8A, C9, C5, PRNP |
| rno01100 | Metabolic pathways | 30 | 1.17 × 10−2 | 1.556 | CYP2B3, CYP2J4, PGS1, CDIPT, TUSC3, ALDOC, HSD3B5, KMO, ANPEP, ATP5G3, CKB, TDO2, ADH1, CYP2C13, UGT2A3, CYP2C6V1, MAN2A2, HAO1, UGT2B37, UGT2B17, BAAT, CYP3A23/3A1, BHMT, PON1, CYP2C23, LIPC, RDH16, CYP2A1, CYP2A2, PRPS2 |
| rno00590 | Arachidonic acid metabolism | 5 | 3.16 × 10−2 | 4.140 | CYP2C6V1, CYP2B3, CYP2J4, CYP2C23, CYP2C13 |
| rno04726 | Serotonergic synapse | 6 | 3.63 × 10−2 | 3.245 | CYP2C6V1, CYP2J4, CYP2C23, CYP2D3, CYP2C13, HTR2A |
| rno04360 | Axon guidance | 6 | 4.08 × 10−2 | 3.144 | PLXNA4, SEMA7A, NTN4, SEMA3B, PAK1, UNC5C |
Figure 3Interaction of differentially expressed genes between vil-high group and diabetic group from String software. Angptl3, Bhmt, and Pon1 are circled in red.
The top 10 genes from gene interaction analysis.
| Gene Accession | Gene Symbol | gene name | degree |
|---|---|---|---|
| NM_019369 | Itih4 | inter-alpha-trypsin inhibitor heavy chain family, member 4 | 17 |
| NM_053491 | Plg | plasminogen | 16 |
| NM_001014006 | F12 | coagulation factor XII (Hageman factor) | 12 |
| NM_001012027 | Serpinc1 | serpin peptidase inhibitor, clade C (antithrombin), member 1 | 11 |
| NM_138514 | Cyp2c13 | cytochrome P450, family 2, subfamily c, polypeptide 13 | 9 |
| NM_019287 | Apob | apolipoprotein B | 8 |
| ENSRNOT00000074103 | Cyp2c6 | cytochrome P450, family 2, subfamily C, polypeptide 6, variant 1 | 8 |
| NM_053318 | Hpx | hemopexin | 8 |
| NM_022519 | Serpina1 | clade A (alpha-1 antiproteinase, antitrypsin), member 1 | 8 |
| NM_001108802 | Speg | SPEG complex locus | 7 |
Figure 4Confirmation of three representative differentially expressed genes by qPCR. Values are mean ± SD (n = 6). Angptl3: angiopoietin-like 3; Bhmt: betaine-homocysteine S-methyltransferase; Pon1: paraoxonase 1. P < 0.01 versus control group; ##P < 0.01 versus diabetic group. vil-low: low dose of vildagliptin; vil-high: high dose of vildagliptin.
Figure 5The possible mechanism of attenuation of vildagliptin on endothelial dysfunction. Vildagliptin attenuates endothelial dysfunction in diabetic rats through activating Pon1 expression in aorta to inhibit oxLDL production; inhibiting Bhmt expression to reduce Met and SAM production; inhibiting Angptl3 expression to activate LPL activity and thereby reduce plasma TG level. LDL: low-density lipoprotein; Pon1: paraoxonase 1; oxLDL: oxidized low-density lipoprotein; Hcy: homocysteine; Bhmt: betaine-homocysteine S-methyltransferase; Met: methionine, SAM: S-adenosylmethionine; TG: triglyceride.