Literature DB >> 29950394

Pseudotime Ordering of Single Human β-Cells Reveals States of Insulin Production and Unfolded Protein Response.

Yurong Xin1, Giselle Dominguez Gutierrez1, Haruka Okamoto1, Jinrang Kim1, Ann-Hwee Lee1, Christina Adler1, Min Ni1, George D Yancopoulos1, Andrew J Murphy1, Jesper Gromada2.   

Abstract

Proinsulin is a misfolding-prone protein, making its biosynthesis in the endoplasmic reticulum (ER) a stressful event. Pancreatic β-cells overcome ER stress by activating the unfolded protein response (UPR) and reducing insulin production. This suggests that β-cells transition between periods of high insulin biosynthesis and UPR-mediated recovery from cellular stress. We now report the pseudotime ordering of single β-cells from humans without diabetes detected by large-scale RNA sequencing. We identified major states with 1) low UPR and low insulin gene expression, 2) low UPR and high insulin gene expression, or 3) high UPR and low insulin gene expression. The latter state was enriched for proliferating cells. Stressed human β-cells do not dedifferentiate and show little propensity for apoptosis. These data suggest that human β-cells transition between states with high rates of biosynthesis to fulfill the body's insulin requirements to maintain normal blood glucose levels and UPR-mediated recovery from ER stress due to high insulin production.
© 2018 by the American Diabetes Association.

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Year:  2018        PMID: 29950394     DOI: 10.2337/db18-0365

Source DB:  PubMed          Journal:  Diabetes        ISSN: 0012-1797            Impact factor:   9.461


  53 in total

1.  Discordance between GLP-1R gene and protein expression in mouse pancreatic islet cells.

Authors:  Sarah M Gray; Yurong Xin; Elizabeth C Ross; Bryanna M Chazotte; Megan E Capozzi; Kimberley El; Berit Svendsen; Peter Ravn; Kyle W Sloop; Jenny Tong; Jesper Gromada; Jonathan E Campbell; David A D'Alessio
Journal:  J Biol Chem       Date:  2020-06-18       Impact factor: 5.157

2.  Single-cell transcriptomics from human pancreatic islets: sample preparation matters.

Authors:  Lori L Bonnycastle; Derek E Gildea; Tingfen Yan; Narisu Narisu; Amy J Swift; Tyra G Wolfsberg; Michael R Erdos; Francis S Collins
Journal:  Biol Methods Protoc       Date:  2020-01-16

Review 3.  Single-Cell RNA-Seq of the Pancreatic Islets--a Promise Not yet Fulfilled?

Authors:  Yue J Wang; Klaus H Kaestner
Journal:  Cell Metab       Date:  2018-12-20       Impact factor: 27.287

4.  A Computational Approach for Defining a Signature of β-Cell Golgi Stress in Diabetes.

Authors:  Robert N Bone; Olufunmilola Oyebamiji; Sayali Talware; Sharmila Selvaraj; Preethi Krishnan; Farooq Syed; Huanmei Wu; Carmella Evans-Molina
Journal:  Diabetes       Date:  2020-08-20       Impact factor: 9.461

Review 5.  Paracrine signaling in islet function and survival.

Authors:  Sean M Hartig; Aaron R Cox
Journal:  J Mol Med (Berl)       Date:  2020-02-17       Impact factor: 4.599

6.  Gene Signature of the Human Pancreatic ε Cell.

Authors:  Giselle Dominguez Gutierrez; Jinrang Kim; Ann-Hwee Lee; Jenny Tong; JingJing Niu; Sarah M Gray; Yi Wei; Yueming Ding; Min Ni; Christina Adler; Andrew J Murphy; Jesper Gromada; Yurong Xin
Journal:  Endocrinology       Date:  2018-12-01       Impact factor: 4.736

7.  Human Islets Contain a Beta Cell Type That Expresses Proinsulin But Not the Enzyme That Converts the Precursor to Insulin.

Authors:  Gladys Teitelman
Journal:  J Histochem Cytochem       Date:  2020-10       Impact factor: 2.479

8.  Interpreting type 1 diabetes risk with genetics and single-cell epigenomics.

Authors:  Joshua Chiou; Ryan J Geusz; Mei-Lin Okino; Jee Yun Han; Michael Miller; Rebecca Melton; Elisha Beebe; Paola Benaglio; Serina Huang; Katha Korgaonkar; Sandra Heller; Alexander Kleger; Sebastian Preissl; David U Gorkin; Maike Sander; Kyle J Gaulton
Journal:  Nature       Date:  2021-05-19       Impact factor: 49.962

9.  In vivo screen identifies a SIK inhibitor that induces β cell proliferation through a transient UPR.

Authors:  Lipeng Ren; Rohit B Sharma; Jérémie Charbord; Anna Johansson; Rasmus Ågren; Lianhe Chu; Dominika Tworus; Nadja Schulz; Pierre Charbord; Andrew F Stewart; Peng Wang; Laura C Alonso; Olov Andersson
Journal:  Nat Metab       Date:  2021-05-20

10.  Quantifying the effect of experimental perturbations at single-cell resolution.

Authors:  Daniel B Burkhardt; Jay S Stanley; Alexander Tong; Ana Luisa Perdigoto; Scott A Gigante; Kevan C Herold; Guy Wolf; Antonio J Giraldez; David van Dijk; Smita Krishnaswamy
Journal:  Nat Biotechnol       Date:  2021-02-08       Impact factor: 54.908

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