| Literature DB >> 29946272 |
Vadim Yuferov1, Yong Zhang1, Yupu Liang2, Connie Zhao3, Matthew Randesi1, Mary J Kreek1.
Abstract
Oxycodone is one a commonly used medication for pain, and is also a widely abused prescription opioid, like other short-acting MOPr agonists. Neurochemical and structural adaptations in brain following chronic MOPr-agonist administration are thought to underlie pathogenesis and persistence of opiate addiction. Many axon guidance molecules, such as integrins, semaphorins, and ephrins may contribute to oxycodone-induced neuroadaptations through alterations in axon-target connections and synaptogenesis, that may be implicated in the behaviors associated with opiate addiction. However, little is known about this important area. The aim of this study is to investigate alterations in expression of selected integrin, semaphorin, ephrins, netrin, and slit genes in the nucleus accumbens (NAc) and caudate putamen (CPu) of mice following extended 14-day oxycodone self-administration (SA), using RNAseq.Entities:
Keywords: RNA seq; axon guidance genes; cell type enrichment; integrins; oxycodone
Year: 2018 PMID: 29946272 PMCID: PMC6005861 DOI: 10.3389/fpsyt.2018.00257
Source DB: PubMed Journal: Front Psychiatry ISSN: 1664-0640 Impact factor: 4.157
Cell type enrichment of integrin, semaphorin, and ephrin.
| Itgal | −2.235 | −2.235 | −1.419 | |
| Itga1 | −2.179 | −4.461 | −5.737 | |
| Itga3 | −2.095 | −4.006 | ||
| Itga9 | −5.707 | −3.4 | −2.568 | |
| Itgal.1 | −2.235 | −2.235 | −1.419 | |
| Itgam | −8.218 | −7.842 | −8.752 | |
| Itgb2 | −7.874 | −6.023 | −5.103 | |
| Itgb2.1 | −7.874 | −6.023 | −5.103 | |
| Itgb8 | −1.988 | −6.774 | −6.7 | |
| Nrp2 | −2.55 | 0.197 | 0.802 | |
| Plxdc1 | −4.265 | 0.264 | 0.494 | |
| Plxdc2 | −1.234 | −1.446 | −2.651 | |
| Plxnd1 | −3.509 | 1.016 | −0.667 | |
| Sema3c | −3.559 | −5.425 | ||
| Sema4g | −0.77 | −0.153 | −4.345 | |
| Sema6a | −0.977 | −7.241 | −0.245 | |
| Sema6d | −1.622 | −3.912 | 0.376 | |
| Sema7a | −3.782 | −2.209 | −3.772 | |
| Efna3 | −2.091 | −2.668 | −2.987 | |
| Epha3 | −2.207 | −3.799 | −3.525 | |
Example of calculation of a fold enrichment of a gene in a specific cell type: Log2 [expression of X gene in astroglia divided by average expression of X gene in non-astrocyte cell types (N+MGL+Endo)]. Bolded numbers show the highest enrichment of X gene transcripts in a specific cell type. Positive numbers indicate a higher abundance of gene X expression in a particularly cell type, compared with its expression in other cells.
Axon gudance and integrin genes with differential expression in the mouse nucleus accumbens and caudate putamen following 14 days of oxycodone self-administration (FDR < 0.1, FC > 15%).
| 2.54 | ↑ | 0.00000 | 0.0000 | Integrin alpha L | |
| 1.69 | ↑ | 0.00006 | 0.0068 | Integrin beta 2 | |
| 1.40 | ↑ | 0.00637 | 0.0910 | Semaphorin 7a | |
| 1.32 | ↑ | 0.00102 | 0.0464 | Plexin dc1 | |
| 1.48 | ↑ | 0.00376 | 0.0693 | Plexin d1 | |
| 1.29 | ↑ | 0.00519 | 0.0852 | Integrin alpha M | |
| 0.77 | ↓ | 0.00298 | 0.0620 | Ephrin receptor a3 | |
| 0.77 | ↓ | 0.00223 | 0.0618 | Semaphorin 3c | |
| 0.75 | ↓ | 0.00482 | 0.0821 | Semaphorin 4g | |
| 0.82 | ↓ | 0.00782 | 0.1050 | Semaphorin 6a | |
| 0.84 | ↓ | 0.06142 | 0.0583 | Semaphorin 6d | |
| 0.61 | ↓ | 0.00165 | 0.0583 | Neuropilin 2 | |
| 0.77 | ↓ | 0.00244 | 0.0620 | Integrin a3 | |
| 0.86 | ↓ | 0.00583 | 0.0861 | Integrin b8 | |
| 2.53 | ↑ | 0.00000 | 0.0002 | Integrin alpha L | |
| 2.14 | ↑ | 0.00003 | 0.0041 | Integrin beta 2 | |
| 1.48 | ↑ | 0.00060 | 0.0323 | Integrin alpha 1 | |
| 0.72 | ↓ | 0.00004 | 0.0042 | Integrin alpha 9 | |
| 0.71 | ↓ | 0.00185 | 0.0747 | Ephrin A3 | |