Literature DB >> 29938714

Identifying High Order Brain Connectome Biomarkers via Learning on Hypergraph.

Chen Zu1,2, Yue Gao3, Brent Munsell4, Minjeong Kim1, Ziwen Peng5, Yingying Zhu1, Wei Gao6, Daoqiang Zhang2, Dinggang Shen1, Guorong Wu1.   

Abstract

The functional connectome has gained increased attention in the neuroscience community. In general, most network connectivity models are based on correlations between discrete-time series signals that only connect two different brain regions. However, these bivariate region-to-region models do not involve three or more brain regions that form a subnetwork. Here we propose a learning-based method to explore subnetwork biomarkers that are significantly distinguishable between two clinical cohorts. Learning on hypergraph is employed in our work. Specifically, we construct a hypergraph by exhaustively inspecting all possible subnetworks for all subjects, where each hyperedge connects a group of subjects demonstrating highly correlated functional connectivity behavior throughout the underlying subnetwork. The objective function of hypergraph learning is to jointly optimize the weights for all hyperedges which make the separation of two groups by the learned data representation be in the best consensus with the observed clinical labels. We deploy our method to find high order childhood autism biomarkers from rs-fMRI images. Promising results have been obtained from comprehensive evaluation on the discriminative power and generality in diagnosis of Autism.

Entities:  

Year:  2016        PMID: 29938714      PMCID: PMC6014614          DOI: 10.1007/978-3-319-47157-0_1

Source DB:  PubMed          Journal:  Mach Learn Med Imaging


  5 in total

Review 1.  Exploring the brain network: a review on resting-state fMRI functional connectivity.

Authors:  Martijn P van den Heuvel; Hilleke E Hulshoff Pol
Journal:  Eur Neuropsychopharmacol       Date:  2010-05-14       Impact factor: 4.600

2.  Identifying major depression using whole-brain functional connectivity: a multivariate pattern analysis.

Authors:  Ling-Li Zeng; Hui Shen; Li Liu; Lubin Wang; Baojuan Li; Peng Fang; Zongtan Zhou; Yaming Li; Dewen Hu
Journal:  Brain       Date:  2012-03-14       Impact factor: 13.501

Review 3.  The new neurobiology of autism: cortex, connectivity, and neuronal organization.

Authors:  Nancy J Minshew; Diane L Williams
Journal:  Arch Neurol       Date:  2007-07

4.  Multisite functional connectivity MRI classification of autism: ABIDE results.

Authors:  Jared A Nielsen; Brandon A Zielinski; P Thomas Fletcher; Andrew L Alexander; Nicholas Lange; Erin D Bigler; Janet E Lainhart; Jeffrey S Anderson
Journal:  Front Hum Neurosci       Date:  2013-09-25       Impact factor: 3.169

5.  The autism brain imaging data exchange: towards a large-scale evaluation of the intrinsic brain architecture in autism.

Authors:  A Di Martino; C-G Yan; Q Li; E Denio; F X Castellanos; K Alaerts; J S Anderson; M Assaf; S Y Bookheimer; M Dapretto; B Deen; S Delmonte; I Dinstein; B Ertl-Wagner; D A Fair; L Gallagher; D P Kennedy; C L Keown; C Keysers; J E Lainhart; C Lord; B Luna; V Menon; N J Minshew; C S Monk; S Mueller; R-A Müller; M B Nebel; J T Nigg; K O'Hearn; K A Pelphrey; S J Peltier; J D Rudie; S Sunaert; M Thioux; J M Tyszka; L Q Uddin; J S Verhoeven; N Wenderoth; J L Wiggins; S H Mostofsky; M P Milham
Journal:  Mol Psychiatry       Date:  2013-06-18       Impact factor: 15.992

  5 in total
  2 in total

1.  Multimodal Feature Fusion Based Hypergraph Learning Model.

Authors:  Zhe Yang; Liangkui Xu; Lei Zhao
Journal:  Comput Intell Neurosci       Date:  2022-05-16

2.  rs-fMRI and machine learning for ASD diagnosis: a systematic review and meta-analysis.

Authors:  Caio Pinheiro Santana; Emerson Assis de Carvalho; Igor Duarte Rodrigues; Guilherme Sousa Bastos; Adler Diniz de Souza; Lucelmo Lacerda de Brito
Journal:  Sci Rep       Date:  2022-04-11       Impact factor: 4.379

  2 in total

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