Literature DB >> 29925614

Ocean warming alters predicted microbiome functionality in a common sea urchin.

Cecilia J Brothers1, William J Van Der Pol2, Casey D Morrow3, Joseph A Hakim4, Hyunmin Koo4, James B McClintock4.   

Abstract

The microbiome of sea urchins plays a role in maintaining digestive health and innate immunity. Here, we investigated the effects of long-term (90 day) exposure to elevated seawater temperatures on the microbiome of the common, subtropical sea urchin Lytechinus variegatus The community composition and diversity of microbes varied according to the type of sample collected from the sea urchin (seawater, feed, intestines, coelomic fluid, digested pellet and faeces), with the lowest microbial diversity (predominately the order Campylobacterales) located in the intestinal tissue. Sea urchins exposed to near-future seawater temperatures maintained the community structure and diversity of microbes associated with their tissues. However, marginal, non-significant shifts in microbial community structure with elevated temperature resulted in significant changes in predicted metagenomic functions such as membrane transport and amino acid and carbohydrate metabolism. The predicted changes in key metabolic categories suggest that near-future climate-induced increases in seawater temperature could shift microbial community function and impact sea urchin digestive and immune physiology.
© 2018 The Author(s).

Entities:  

Keywords:  16S rRNA; Lytechinus variegatus; PICRUSt; climate change; microbial ecology; next-generation sequencing

Mesh:

Year:  2018        PMID: 29925614      PMCID: PMC6030520          DOI: 10.1098/rspb.2018.0340

Source DB:  PubMed          Journal:  Proc Biol Sci        ISSN: 0962-8452            Impact factor:   5.349


  22 in total

1.  The KEGG resource for deciphering the genome.

Authors:  Minoru Kanehisa; Susumu Goto; Shuichi Kawashima; Yasushi Okuno; Masahiro Hattori
Journal:  Nucleic Acids Res       Date:  2004-01-01       Impact factor: 16.971

2.  The impact of reduced pH on the microbial community of the coral Acropora eurystoma.

Authors:  Dalit Meron; Elinor Atias; Lilach Iasur Kruh; Hila Elifantz; Dror Minz; Maoz Fine; Ehud Banin
Journal:  ISME J       Date:  2010-07-29       Impact factor: 10.302

Review 3.  Insights into the Coral Microbiome: Underpinning the Health and Resilience of Reef Ecosystems.

Authors:  David G Bourne; Kathleen M Morrow; Nicole S Webster
Journal:  Annu Rev Microbiol       Date:  2016-07-08       Impact factor: 15.500

Review 4.  Trade-offs in thermal adaptation: the need for a molecular to ecological integration.

Authors:  Hans O Pörtner; Albert F Bennett; Francisco Bozinovic; Andrew Clarke; Marco A Lardies; Magnus Lucassen; Bernd Pelster; Fritz Schiemer; Jonathon H Stillman
Journal:  Physiol Biochem Zool       Date:  2006-02-14       Impact factor: 2.247

5.  A member of the Roseobacter clade, Octadecabacter sp., is the dominant symbiont in the brittle star Amphipholis squamata.

Authors:  Kathleen M Morrow; Abbey Rose Tedford; M Sabrina Pankey; Michael P Lesser
Journal:  FEMS Microbiol Ecol       Date:  2018-04-01       Impact factor: 4.194

6.  Ultra-high-throughput microbial community analysis on the Illumina HiSeq and MiSeq platforms.

Authors:  J Gregory Caporaso; Christian L Lauber; William A Walters; Donna Berg-Lyons; James Huntley; Noah Fierer; Sarah M Owens; Jason Betley; Louise Fraser; Markus Bauer; Niall Gormley; Jack A Gilbert; Geoff Smith; Rob Knight
Journal:  ISME J       Date:  2012-03-08       Impact factor: 10.302

7.  Pyrosequencing of 16S rRNA gene amplicons to study the microbiota in the gastrointestinal tract of carp (Cyprinus carpio L.).

Authors:  Maartje Ahj van Kessel; Bas E Dutilh; Kornelia Neveling; Michael P Kwint; Joris A Veltman; Gert Flik; Mike Sm Jetten; Peter Hm Klaren; Huub Jm Op den Camp
Journal:  AMB Express       Date:  2011-11-18       Impact factor: 3.298

8.  Host-associated coral reef microbes respond to the cumulative pressures of ocean warming and ocean acidification.

Authors:  N S Webster; A P Negri; E S Botté; P W Laffy; F Flores; S Noonan; C Schmidt; S Uthicke
Journal:  Sci Rep       Date:  2016-01-13       Impact factor: 4.379

9.  Overfishing and nutrient pollution interact with temperature to disrupt coral reefs down to microbial scales.

Authors:  Jesse R Zaneveld; Deron E Burkepile; Andrew A Shantz; Catharine E Pritchard; Ryan McMinds; Jérôme P Payet; Rory Welsh; Adrienne M S Correa; Nathan P Lemoine; Stephanie Rosales; Corinne Fuchs; Jeffrey A Maynard; Rebecca Vega Thurber
Journal:  Nat Commun       Date:  2016-06-07       Impact factor: 14.919

10.  Bacterial community composition in the gut content and ambient sediment of sea cucumber Apostichopus japonicus revealed by 16S rRNA gene pyrosequencing.

Authors:  Fei Gao; Fenghui Li; Jie Tan; Jingping Yan; Huiling Sun
Journal:  PLoS One       Date:  2014-06-26       Impact factor: 3.240

View more
  8 in total

1.  Digestive Enzyme Activities and Gut Emptying Are Correlated with the Reciprocal Regulation of TRPA1 Ion Channel and Serotonin in the Gut of the Sea Urchin Strongylocentrotus intermedius.

Authors:  Jingyun Ding; Huiyan Wang; Zequn Li; Jiangnan Sun; Peng Ding; Xiaomei Chi; Mingfang Yang; Yaqing Chang; Chong Zhao
Journal:  Biology (Basel)       Date:  2022-03-24

Review 2.  Temperature as a modulator of the gut microbiome: what are the implications and opportunities for thermal medicine?

Authors:  Bonnie L Hylander; Elizabeth A Repasky
Journal:  Int J Hyperthermia       Date:  2019-11       Impact factor: 3.914

3.  Microbiome shifts with onset and progression of Sea Star Wasting Disease revealed through time course sampling.

Authors:  Melanie M Lloyd; Melissa H Pespeni
Journal:  Sci Rep       Date:  2018-11-07       Impact factor: 4.379

4.  The Purple Sea Urchin Strongylocentrotus purpuratus Demonstrates a Compartmentalization of Gut Bacterial Microbiota, Predictive Functional Attributes, and Taxonomic Co-Occurrence.

Authors:  Joseph A Hakim; Julie B Schram; Aaron W E Galloway; Casey D Morrow; Michael R Crowley; Stephen A Watts; Asim K Bej
Journal:  Microorganisms       Date:  2019-01-26

5.  Composition and geographic variation of the bacterial microbiota associated with the coelomic fluid of the sea urchin Paracentrotus lividus.

Authors:  Teresa Faddetta; Francesco Ardizzone; Francesca Faillaci; Chiara Reina; Emilia Palazzotto; Francesco Strati; Carlotta De Filippo; Giovanni Spinelli; Anna Maria Puglia; Giuseppe Gallo; Vincenzo Cavalieri
Journal:  Sci Rep       Date:  2020-12-08       Impact factor: 4.379

Review 6.  The Role of the Microbiota in Regeneration-Associated Processes.

Authors:  Lymarie M Díaz-Díaz; Andrea Rodríguez-Villafañe; José E García-Arrarás
Journal:  Front Cell Dev Biol       Date:  2022-01-26

7.  Microbial Composition and Genes for Key Metabolic Attributes in the Gut Digesta of Sea Urchins Lytechinus variegatus and Strongylocentrotus purpuratus Using Shotgun Metagenomics.

Authors:  Joseph A Hakim; George B H Green; Stephen A Watts; Michael R Crowley; Casey D Morrow; Asim K Bej
Journal:  Curr Issues Mol Biol       Date:  2021-08-26       Impact factor: 2.976

8.  Variation in the Microbiota Associated with Daphnia magna Across Genotypes, Populations, and Temperature.

Authors:  Jonas Frankel-Bricker; Michael J Song; Maia J Benner; Sarah Schaack
Journal:  Microb Ecol       Date:  2019-08-03       Impact factor: 4.552

  8 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.