Literature DB >> 29923154

Analysis of HOXB1 gene in a cohort of patients with sporadic ventricular septal defect.

Amélie Pinard1,2, Nathalie Eudes1, Julia Mitchell1,3, Fanny Bajolle4,5, Maude Grelet1, Joséphine Okoronkwo4,5, Damien Bonnet4,5, Gwenaelle Collod-Béroud1, Stéphane Zaffran6,7.   

Abstract

Ventricular septal defect (VSD) including outlet VSD of double outlet right ventricle (DORV) and perimembranous VSD are among the most common congenital heart diseases found at birth. HOXB1 encodes a homeodomain transcription factor essential for normal cardiac outflow tract development. The aim of the present study was to investigate the possible genetic effect of sequence variations in HOXB1 on VSD. The coding regions and splice junctions of the HOXB1 gene were sequenced in 57 unrelated VSD patients. As a result, a homozygous c.74_82dup (p.Pro28delinsHisSerAlaPro) variant was identified in one individual with DORV. We also identified five previously reported polymorphisms (rs35114525, rs12946855, rs14534040, rs12939811, and rs7207109) in 18 patients (12 DORV and 6 perimembranous VSD). Our study did not show any pathogenic alterations in the coding region of HOXB1 among patients with VSD. To our knowledge this is the first study investigating the role of HOXB1 in nonsyndromic VSD, which provide more insight on the etiology of this disease.

Entities:  

Keywords:  Congenital heart disease; Genetics; HOXB1; Variant; Ventricular septal defect

Mesh:

Substances:

Year:  2018        PMID: 29923154     DOI: 10.1007/s11033-018-4212-x

Source DB:  PubMed          Journal:  Mol Biol Rep        ISSN: 0301-4851            Impact factor:   2.316


  34 in total

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Authors:  Nadja Makki; Mario R Capecchi
Journal:  Hum Mol Genet       Date:  2011-09-22       Impact factor: 6.150

5.  MutationTaster2: mutation prediction for the deep-sequencing age.

Authors:  Jana Marie Schwarz; David N Cooper; Markus Schuelke; Dominik Seelow
Journal:  Nat Methods       Date:  2014-04       Impact factor: 28.547

6.  Hoxa1 and Hoxb1 are required for pharyngeal arch artery development.

Authors:  Marine Roux; Brigitte Laforest; Nathalie Eudes; Nicolas Bertrand; Sonia Stefanovic; Stéphane Zaffran
Journal:  Mech Dev       Date:  2016-12-10       Impact factor: 1.882

7.  Ablation of the secondary heart field leads to tetralogy of Fallot and pulmonary atresia.

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Journal:  Dev Biol       Date:  2005-08-01       Impact factor: 3.582

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Authors:  Mary S Minette; David J Sahn
Journal:  Circulation       Date:  2006-11-14       Impact factor: 29.690

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Authors:  L Caravella; G L Rogers
Journal:  Ann Ophthalmol       Date:  1978-04

10.  IBS: an illustrator for the presentation and visualization of biological sequences.

Authors:  Wenzhong Liu; Yubin Xie; Jiyong Ma; Xiaotong Luo; Peng Nie; Zhixiang Zuo; Urs Lahrmann; Qi Zhao; Yueyuan Zheng; Yong Zhao; Yu Xue; Jian Ren
Journal:  Bioinformatics       Date:  2015-06-10       Impact factor: 6.937

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