Literature DB >> 29923040

The Irving-Williams series and the 2-His-1-carboxylate facial triad: a thermodynamic study of Mn2+, Fe2+, and Co2+ binding to taurine/α-ketoglutarate dioxygenase (TauD).

Mingjie Li1, Kate L Henderson1,2, Salette Martinez3,4, Robert P Hausinger3,5, Joseph P Emerson6.   

Abstract

Taurine/α-ketoglutarate (αKG) dioxygenase (TauD) is an E. coli nonheme Fe2+- and αKG-dependent metalloenzyme that catalyzes the hydroxylation of taurine, leading to the production of sulfite. The metal-dependent active site in TauD is formed by two histidine and one aspartate that coordinating to one face of an octahedral coordination geometry, known as the 2-His-1-carboxylate facial triad. This motif is found in many nonheme Fe2+ proteins, but there is limited information on the thermodynamic parameters that govern metal-ion binding to this site. Here, we report data from calorimetry and related biophysical techniques to generate complete thermodynamic profiles of Mn2+ and Co2+ binding to TauD, and these values are compared to the Fe2+ data reported earlier Henderson et al. (Inorg Chem 54: 2278-2283, 2015). The buffer-independent binding constants (K) were measured to be 1.6 × 106, 2.4 × 107, and 1.7 × 109, for Mn2+, Fe2+, and Co2+, respectively. The corresponding ΔG° values were calculated to be - 8.4, - 10.1, and - 12.5 kcal/mol, respectively. The metal-binding enthalpy changes (ΔH) for these binding events are - 11.1 (± 0.1), - 12.2 (± 0.1), and - 16.0 (± 0.6) kcal/mol, respectively. These data are fully consistent with the Irving-Williams series, which show an increasing affinity for transition metal ions across the periodic table. It appears that the periodic increase in affinity, however, is a result of a complicated summation of enthalpy terms (including favorable metal-ion coordination processes and unfavorable ionization events) and related entropy terms.

Entities:  

Keywords:  Cobalt(II); Irving–Williams series; Isothermal titration calorimetry; Manganese(II); Metal binding; Thermodynamics

Mesh:

Substances:

Year:  2018        PMID: 29923040      PMCID: PMC7063563          DOI: 10.1007/s00775-018-1574-4

Source DB:  PubMed          Journal:  J Biol Inorg Chem        ISSN: 0949-8257            Impact factor:   3.358


  33 in total

1.  A nickel-cobalt-sensing ArsR-SmtB family repressor. Contributions of cytosol and effector binding sites to metal selectivity.

Authors:  Jennifer S Cavet; Wenmao Meng; Mario A Pennella; Rebecca J Appelhoff; David P Giedroc; Nigel J Robinson
Journal:  J Biol Chem       Date:  2002-08-05       Impact factor: 5.157

2.  Modern proteomes contain putative imprints of ancient shifts in trace metal geochemistry.

Authors:  Christopher L Dupont; Song Yang; Brian Palenik; Philip E Bourne
Journal:  Proc Natl Acad Sci U S A       Date:  2006-11-10       Impact factor: 11.205

3.  Calorimetric assessment of Fe(2+) binding to α-ketoglutarate/taurine dioxygenase: ironing out the energetics of metal coordination by the 2-His-1-carboxylate facial triad.

Authors:  Kate L Henderson; Tina A Müller; Robert P Hausinger; Joseph P Emerson
Journal:  Inorg Chem       Date:  2015-02-10       Impact factor: 5.165

4.  Global stability of an α-ketoglutarate-dependent dioxygenase (TauD) and its related complexes.

Authors:  Kate L Henderson; Mingjie Li; Salette Martinez; Edwin A Lewis; Robert P Hausinger; Joseph P Emerson
Journal:  Biochim Biophys Acta Gen Subj       Date:  2017-02-15       Impact factor: 3.770

Review 5.  The 2-His-1-carboxylate facial triad: a versatile platform for dioxygen activation by mononuclear non-heme iron(II) enzymes.

Authors:  Kevin D Koehntop; Joseph P Emerson; Lawrence Que
Journal:  J Biol Inorg Chem       Date:  2005-03-01       Impact factor: 3.358

Review 6.  The challenges of determining metal-protein affinities.

Authors:  Zhiguang Xiao; Anthony G Wedd
Journal:  Nat Prod Rep       Date:  2010-05       Impact factor: 13.423

7.  Coordination numbers of hydrated divalent transition metal ions investigated with IRPD spectroscopy.

Authors:  Jeremy T O'Brien; Evan R Williams
Journal:  J Phys Chem A       Date:  2011-12-01       Impact factor: 2.781

8.  Revisiting zinc coordination in human carbonic anhydrase II.

Authors:  He Song; David L Wilson; Erik R Farquhar; Edwin A Lewis; Joseph P Emerson
Journal:  Inorg Chem       Date:  2012-10-03       Impact factor: 5.165

Review 9.  Bacterial iron homeostasis.

Authors:  Simon C Andrews; Andrea K Robinson; Francisco Rodríguez-Quiñones
Journal:  FEMS Microbiol Rev       Date:  2003-06       Impact factor: 16.408

Review 10.  Metal preferences and metallation.

Authors:  Andrew W Foster; Deenah Osman; Nigel J Robinson
Journal:  J Biol Chem       Date:  2014-08-26       Impact factor: 5.157

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