Literature DB >> 29915236

Single-molecule probing of the conformational homogeneity of the ABC transporter BtuCD.

Min Yang1, Nurit Livnat Levanon2, Burçin Acar3, Burcu Aykac Fas3, Gal Masrati4, Jessica Rose2, Nir Ben-Tal5, Turkan Haliloglu6, Yongfang Zhao1, Oded Lewinson7.   

Abstract

ATP-binding cassette (ABC) transporters use the energy of ATP hydrolysis to move molecules through cellular membranes. They are directly linked to human diseases, cancer multidrug resistance, and bacterial virulence. Very little is known of the conformational dynamics of ABC transporters, especially at the single-molecule level. Here, we combine single-molecule spectroscopy and a novel molecular simulation approach to investigate the conformational dynamics of the ABC transporter BtuCD. We observe a single dominant population of molecules in each step of the transport cycle and tight coupling between conformational transitions and ligand binding. We uncover transient conformational changes that allow substrate to enter the transporter. This is followed by a 'squeezing' motion propagating from the extracellular to the intracellular side of the translocation cavity. This coordinated sequence of events provides a mechanism for the unidirectional transport of vitamin B12 by BtuCD.

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Year:  2018        PMID: 29915236     DOI: 10.1038/s41589-018-0088-2

Source DB:  PubMed          Journal:  Nat Chem Biol        ISSN: 1552-4450            Impact factor:   15.040


  15 in total

1.  Crystal Structure of the Siderophore Binding Protein BauB Bound to an Unusual 2:1 Complex Between Acinetobactin and Ferric Iron.

Authors:  Daniel C Bailey; Tabbetha J Bohac; Justin A Shapiro; Daryl E Giblin; Timothy A Wencewicz; Andrew M Gulick
Journal:  Biochemistry       Date:  2018-11-15       Impact factor: 3.162

2.  Single-molecule FRET methods to study the dynamics of proteins at work.

Authors:  Hisham Mazal; Gilad Haran
Journal:  Curr Opin Biomed Eng       Date:  2019-08-23

3.  Conformational dynamics of the ABC transporter McjD seen by single-molecule FRET.

Authors:  Florence Husada; Kiran Bountra; Konstantinos Tassis; Marijn de Boer; Maria Romano; Sylvie Rebuffat; Konstantinos Beis; Thorben Cordes
Journal:  EMBO J       Date:  2018-09-20       Impact factor: 11.598

4.  Identifying weak interdomain interactions that stabilize the supertertiary structure of the N-terminal tandem PDZ domains of PSD-95.

Authors:  Inna S Yanez Orozco; Frank A Mindlin; Junyan Ma; Bo Wang; Brie Levesque; Matheu Spencer; Soheila Rezaei Adariani; George Hamilton; Feng Ding; Mark E Bowen; Hugo Sanabria
Journal:  Nat Commun       Date:  2018-09-13       Impact factor: 14.919

5.  ABCE1 Controls Ribosome Recycling by an Asymmetric Dynamic Conformational Equilibrium.

Authors:  Giorgos Gouridis; Bianca Hetzert; Kristin Kiosze-Becker; Marijn de Boer; Holger Heinemann; Elina Nürenberg-Goloub; Thorben Cordes; Robert Tampé
Journal:  Cell Rep       Date:  2019-07-16       Impact factor: 9.423

6.  Emergence of Ferrichelatase Activity in a Siderophore-Binding Protein Supports an Iron Shuttle in Bacteria.

Authors:  Nathaniel P Endicott; Gerry Sann M Rivera; Jinping Yang; Timothy A Wencewicz
Journal:  ACS Cent Sci       Date:  2020-03-09       Impact factor: 14.553

7.  Conformation space of a heterodimeric ABC exporter under turnover conditions.

Authors:  Susanne Hofmann; Dovile Januliene; Ahmad R Mehdipour; Christoph Thomas; Erich Stefan; Stefan Brüchert; Benedikt T Kuhn; Eric R Geertsma; Gerhard Hummer; Robert Tampé; Arne Moeller
Journal:  Nature       Date:  2019-07-17       Impact factor: 69.504

8.  In silico method for selecting residue pairs for single-molecule microscopy and spectroscopy.

Authors:  Hendrik R Sikkema; Bert Poolman
Journal:  Sci Rep       Date:  2021-03-11       Impact factor: 4.379

Review 9.  Assessing the Role of Lipids in the Molecular Mechanism of Membrane Proteins.

Authors:  Léni Jodaitis; Thomas van Oene; Chloé Martens
Journal:  Int J Mol Sci       Date:  2021-07-06       Impact factor: 5.923

Review 10.  Structures of ABC transporters: handle with care.

Authors:  Oded Lewinson; Cédric Orelle; Markus A Seeger
Journal:  FEBS Lett       Date:  2020-11-21       Impact factor: 3.864

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