Literature DB >> 29912293

CRISPR/Cas9 in plants: at play in the genome and at work for crop improvement.

Babar Hussain1, Stuart James Lucas2, Hikmet Budak3.   

Abstract

The clustered regularly interspaced short palindromic repeats/CRISPR-associated protein 9 (CRISPR/Cas9) system uses single-guide RNAs for genome editing, making it a simple, robust, powerful tool for targeted gene mutagenesis, knockout and knock-in/replacement, as well as transcriptional regulation. Here, we review the working principles, components and potential modifications of CRISPR/Cas9 for efficient single and multiplex gene editing in plants. We also describe recent work that has used CRISPR/Cas9 to improve economically important traits in crop plants. Although the apparent ease of CRISPR/Cas9-mediated editing may make it appear as though scientists are merely playing with plant genomes, the combined power of CRISPR/Cas9 has enabled vital research to be completed in the battle toward optimization and adaptation of crop species, permitting crucial advances to be achieved in crop improvement.

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Substances:

Year:  2018        PMID: 29912293     DOI: 10.1093/bfgp/ely016

Source DB:  PubMed          Journal:  Brief Funct Genomics        ISSN: 2041-2649            Impact factor:   4.241


  11 in total

Review 1.  Optimization of Genome Knock-In Method: Search for the Most Efficient Genome Regions for Transgene Expression in Plants.

Authors:  Sergey M Rozov; Natalya V Permyakova; Yuriy V Sidorchuk; Elena V Deineko
Journal:  Int J Mol Sci       Date:  2022-04-16       Impact factor: 6.208

Review 2.  Clustered Regularly Interspaced Short Palindromic Repeats-Associated Protein System for Resistance Against Plant Viruses: Applications and Perspectives.

Authors:  Fredy D A Silva; Elizabeth P B Fontes
Journal:  Front Plant Sci       Date:  2022-05-26       Impact factor: 6.627

3.  Evaluating the cleavage efficacy of CRISPR-Cas9 sgRNAs targeting ineffective regions of Arabidopsis thaliana genome.

Authors:  Afsheen Malik; Alvina Gul; Faiza Munir; Rabia Amir; Hadi Alipour; Mustafeez Mujtaba Babar; Syeda Marriam Bakhtiar; Rehan Zafar Paracha; Zoya Khalid; Muhammad Qasim Hayat
Journal:  PeerJ       Date:  2021-05-21       Impact factor: 2.984

Review 4.  CRISPR/Cas9 in Planta Hairy Root Transformation: A Powerful Platform for Functional Analysis of Root Traits in Soybean.

Authors:  Mohsen Niazian; François Belzile; Davoud Torkamaneh
Journal:  Plants (Basel)       Date:  2022-04-12

Review 5.  Milestones achieved in response to drought stress through reverse genetic approaches.

Authors:  Baljeet Singh; Sarvjeet Kukreja; Umesh Goutam
Journal:  F1000Res       Date:  2018-08-17

Review 6.  CRISPR/Cas9 and Nanotechnology Pertinence in Agricultural Crop Refinement.

Authors:  Banavath Jayanna Naik; Ganesh Shimoga; Seong-Cheol Kim; Mekapogu Manjulatha; Chinreddy Subramanyam Reddy; Ramasubba Reddy Palem; Manu Kumar; Sang-Youn Kim; Soo-Hong Lee
Journal:  Front Plant Sci       Date:  2022-04-08       Impact factor: 6.627

Review 7.  Capturing Wheat Phenotypes at the Genome Level.

Authors:  Babar Hussain; Bala A Akpınar; Michael Alaux; Ahmed M Algharib; Deepmala Sehgal; Zulfiqar Ali; Gudbjorg I Aradottir; Jacqueline Batley; Arnaud Bellec; Alison R Bentley; Halise B Cagirici; Luigi Cattivelli; Fred Choulet; James Cockram; Francesca Desiderio; Pierre Devaux; Munevver Dogramaci; Gabriel Dorado; Susanne Dreisigacker; David Edwards; Khaoula El-Hassouni; Kellye Eversole; Tzion Fahima; Melania Figueroa; Sergio Gálvez; Kulvinder S Gill; Liubov Govta; Alvina Gul; Goetz Hensel; Pilar Hernandez; Leonardo Abdiel Crespo-Herrera; Amir Ibrahim; Benjamin Kilian; Viktor Korzun; Tamar Krugman; Yinghui Li; Shuyu Liu; Amer F Mahmoud; Alexey Morgounov; Tugdem Muslu; Faiza Naseer; Frank Ordon; Etienne Paux; Dragan Perovic; Gadi V P Reddy; Jochen Christoph Reif; Matthew Reynolds; Rajib Roychowdhury; Jackie Rudd; Taner Z Sen; Sivakumar Sukumaran; Bahar Sogutmaz Ozdemir; Vijay Kumar Tiwari; Naimat Ullah; Turgay Unver; Selami Yazar; Rudi Appels; Hikmet Budak
Journal:  Front Plant Sci       Date:  2022-07-04       Impact factor: 6.627

Review 8.  Impact of Climate Change on Crops Adaptation and Strategies to Tackle Its Outcome: A Review.

Authors:  Ali Raza; Ali Razzaq; Sundas Saher Mehmood; Xiling Zou; Xuekun Zhang; Yan Lv; Jinsong Xu
Journal:  Plants (Basel)       Date:  2019-01-30

9.  Targeted deletion of floral development genes in Arabidopsis with CRISPR/Cas9 using the RNA endoribonuclease Csy4 processing system.

Authors:  Yingzhu Liu; Yike Gao; Yaohui Gao; Qixiang Zhang
Journal:  Hortic Res       Date:  2019-08-21       Impact factor: 6.793

Review 10.  Genetic, Epigenetic, Genomic and Microbial Approaches to Enhance Salt Tolerance of Plants: A Comprehensive Review.

Authors:  Gargi Prasad Saradadevi; Debajit Das; Satendra K Mangrauthia; Sridev Mohapatra; Channakeshavaiah Chikkaputtaiah; Manish Roorkiwal; Manish Solanki; Raman Meenakshi Sundaram; Neeraja N Chirravuri; Akshay S Sakhare; Suneetha Kota; Rajeev K Varshney; Gireesha Mohannath
Journal:  Biology (Basel)       Date:  2021-12-01
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