Literature DB >> 29910177

A Single Multiplex crRNA Array for FnCpf1-Mediated Human Genome Editing.

Huihui Sun1, Fanfan Li2, Jie Liu2, Fayu Yang1, Zhenhai Zeng1, Xiujuan Lv1, Mengjun Tu1, Yeqing Liu1, Xianglian Ge1, Changbao Liu2, Junzhao Zhao2, Zongduan Zhang1, Jia Qu1, Zongming Song3, Feng Gu4.   

Abstract

Cpf1 has been harnessed as a tool for genome manipulation in various species because of its simplicity and high efficiency. Our recent study demonstrated that FnCpf1 could be utilized for human genome editing with notable advantages for target sequence selection due to the flexibility of the protospacer adjacent motif (PAM) sequence. Multiplex genome editing provides a powerful tool for targeting members of multigene families, dissecting gene networks, modeling multigenic disorders in vivo, and applying gene therapy. However, there are no reports at present that show FnCpf1-mediated multiplex genome editing via a single customized CRISPR RNA (crRNA) array. In the present study, we utilize a single customized crRNA array to simultaneously target multiple genes in human cells. In addition, we also demonstrate that a single customized crRNA array to target multiple sites in one gene could be achieved. Collectively, FnCpf1, a powerful genome-editing tool for multiple genomic targets, can be harnessed for effective manipulation of the human genome.
Copyright © 2018 The American Society of Gene and Cell Therapy. Published by Elsevier Inc. All rights reserved.

Entities:  

Keywords:  FnCpf1; crRNA; multiplex genome editing

Mesh:

Substances:

Year:  2018        PMID: 29910177      PMCID: PMC6094396          DOI: 10.1016/j.ymthe.2018.05.021

Source DB:  PubMed          Journal:  Mol Ther        ISSN: 1525-0016            Impact factor:   11.454


  27 in total

1.  Targeted genome modification of crop plants using a CRISPR-Cas system.

Authors:  Qiwei Shan; Yanpeng Wang; Jun Li; Yi Zhang; Kunling Chen; Zhen Liang; Kang Zhang; Jinxing Liu; Jianzhong Jeff Xi; Jin-Long Qiu; Caixia Gao
Journal:  Nat Biotechnol       Date:  2013-08       Impact factor: 54.908

2.  Marker-free coselection for CRISPR-driven genome editing in human cells.

Authors:  Daniel Agudelo; Alexis Duringer; Lusiné Bozoyan; Caroline C Huard; Sophie Carter; Jeremy Loehr; Dafni Synodinou; Mathieu Drouin; Jayme Salsman; Graham Dellaire; Josée Laganière; Yannick Doyon
Journal:  Nat Methods       Date:  2017-04-17       Impact factor: 28.547

3.  Generation of knockout mice by Cpf1-mediated gene targeting.

Authors:  Yongsub Kim; Seung-A Cheong; Jong Geol Lee; Sang-Wook Lee; Myeong Sup Lee; In-Jeoung Baek; Young Hoon Sung
Journal:  Nat Biotechnol       Date:  2016-06-06       Impact factor: 54.908

4.  Multiplexed and programmable regulation of gene networks with an integrated RNA and CRISPR/Cas toolkit in human cells.

Authors:  Lior Nissim; Samuel D Perli; Alexandra Fridkin; Pablo Perez-Pinera; Timothy K Lu
Journal:  Mol Cell       Date:  2014-05-15       Impact factor: 17.970

5.  A CRISPR-Cpf1 system for efficient genome editing and transcriptional repression in plants.

Authors:  Xu Tang; Levi G Lowder; Tao Zhang; Aimee A Malzahn; Xuelian Zheng; Daniel F Voytas; Zhaohui Zhong; Yiyi Chen; Qiurong Ren; Qian Li; Elida R Kirkland; Yong Zhang; Yiping Qi
Journal:  Nat Plants       Date:  2017-02-17       Impact factor: 15.793

6.  A CRISPR Resource for Individual, Combinatorial, or Multiplexed Gene Knockout.

Authors:  Nicolas Erard; Simon R V Knott; Gregory J Hannon
Journal:  Mol Cell       Date:  2017-07-20       Impact factor: 17.970

7.  Cpf1 proteins excise CRISPR RNAs from mRNA transcripts in mammalian cells.

Authors:  Guocai Zhong; Haimin Wang; Yujun Li; Mai H Tran; Michael Farzan
Journal:  Nat Chem Biol       Date:  2017-06-19       Impact factor: 15.040

8.  Multiplex gene regulation by CRISPR-ddCpf1.

Authors:  Xiaochun Zhang; Jingman Wang; Qiuxiang Cheng; Xuan Zheng; Guoping Zhao; Jin Wang
Journal:  Cell Discov       Date:  2017-06-06       Impact factor: 10.849

9.  A CRISPR-based approach for targeted DNA demethylation.

Authors:  Xingxing Xu; Yonghui Tao; Xiaobo Gao; Lei Zhang; Xufang Li; Weiguo Zou; Kangcheng Ruan; Feng Wang; Guo-Liang Xu; Ronggui Hu
Journal:  Cell Discov       Date:  2016-05-03       Impact factor: 10.849

10.  CRISPR-Cpf1 correction of muscular dystrophy mutations in human cardiomyocytes and mice.

Authors:  Yu Zhang; Chengzu Long; Hui Li; John R McAnally; Kedryn K Baskin; John M Shelton; Rhonda Bassel-Duby; Eric N Olson
Journal:  Sci Adv       Date:  2017-04-12       Impact factor: 14.136

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  7 in total

Review 1.  In vivo epigenome editing and transcriptional modulation using CRISPR technology.

Authors:  Cia-Hin Lau; Yousin Suh
Journal:  Transgenic Res       Date:  2018-10-04       Impact factor: 2.788

2.  Mechanistic Insights into the cis- and trans-Acting DNase Activities of Cas12a.

Authors:  Daan C Swarts; Martin Jinek
Journal:  Mol Cell       Date:  2019-01-10       Impact factor: 17.970

3.  Improved LbCas12a variants with altered PAM specificities further broaden the genome targeting range of Cas12a nucleases.

Authors:  Eszter Tóth; Éva Varga; Péter István Kulcsár; Virág Kocsis-Jutka; Sarah Laura Krausz; Antal Nyeste; Zsombor Welker; Krisztina Huszár; Zoltán Ligeti; András Tálas; Ervin Welker
Journal:  Nucleic Acids Res       Date:  2020-04-17       Impact factor: 16.971

4.  Efficient cleavage resolves PAM preferences of CRISPR-Cas in human cells.

Authors:  Lianchao Tang; Fayu Yang; Xiaoxue He; Haihua Xie; Xiaoyu Liu; Junhao Fu; Haitao Xi; Xiaosheng Lu; Changbao Liu; Zongming Song; Jia Qu; Junzhao Zhao; Feng Gu
Journal:  Cell Regen (Lond)       Date:  2019-10-28

5.  Cas12a mediates efficient and precise endogenous gene tagging via MITI: microhomology-dependent targeted integrations.

Authors:  Pan Li; Lijun Zhang; Zhifang Li; Chunlong Xu; Xuguang Du; Sen Wu
Journal:  Cell Mol Life Sci       Date:  2019-12-17       Impact factor: 9.261

6.  Transient CRISPR-Cas Treatment Can Prevent Reactivation of HIV-1 Replication in a Latently Infected T-Cell Line.

Authors:  Ye Liu; Rienk E Jeeninga; Bep Klaver; Ben Berkhout; Atze T Das
Journal:  Viruses       Date:  2021-12-08       Impact factor: 5.048

7.  Engineering the Direct Repeat Sequence of crRNA for Optimization of FnCpf1-Mediated Genome Editing in Human Cells.

Authors:  Li Lin; Xiubin He; Tianyuan Zhao; Lingkai Gu; Yeqing Liu; Xiaoyu Liu; Hongyan Liu; Fayu Yang; Mengjun Tu; Lianchao Tang; Xianglian Ge; Changbao Liu; Junzhao Zhao; Zongming Song; Jia Qu; Feng Gu
Journal:  Mol Ther       Date:  2018-09-01       Impact factor: 11.454

  7 in total

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