Literature DB >> 29909825

Haloalkane Dehalogenases From Marine Organisms.

Antonin Kunka1, Jiri Damborsky1, Zbynek Prokop2.   

Abstract

Haloalkane dehalogenases degrade halogenated compounds to corresponding alcohols by a hydrolytic mechanism. These enzymes are being intensively investigated as model systems in experimental and in silico studies of enzyme mechanism and evolution, but also hold importance as useful biocatalysts for a number of biotechnological applications. Haloalkane dehalogenases originate from various organisms including bacteria (degraders, symbionts, or pathogens), eukaryotes, and archaea. Several members of this enzyme family have been found in marine organisms. The marine environment represents a good source of enzymes with novel properties, because of its diverse living conditions. A number of novel dehalogenases isolated from marine environments show interesting characteristics such as high activity, unusually broad substrate specificity, stability, or selectivity. In this chapter, the overview of haloalkane dehalogenases from marine organisms is presented and their characteristics are summarized together with an overview of the methods for their identification and biochemical characterization.
© 2018 Elsevier Inc. All rights reserved.

Entities:  

Keywords:  Activity; Biocatalyst; Degradation; Environmental pollutants; Haloalkane dehalogenases; Marine environment; Selectivity; Stability

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Year:  2018        PMID: 29909825     DOI: 10.1016/bs.mie.2018.03.005

Source DB:  PubMed          Journal:  Methods Enzymol        ISSN: 0076-6879            Impact factor:   1.600


  4 in total

1.  Census of halide-binding sites in protein structures.

Authors:  Rostislav K Skitchenko; Dmitrii Usoltsev; Mayya Uspenskaya; Andrey V Kajava; Albert Guskov
Journal:  Bioinformatics       Date:  2020-05-01       Impact factor: 6.937

2.  An Ultrasensitive Fluorescence Assay for the Detection of Halides and Enzymatic Dehalogenation.

Authors:  Aşkın S Aslan-Üzel; Andy Beier; David Kovář; Clemens Cziegler; Santosh K Padhi; Eva D Schuiten; Mark Dörr; Dominique Böttcher; Frank Hollmann; Florian Rudroff; Marko D Mihovilovic; Tomáš Buryška; Jiří Damborský; Zbyněk Prokop; Christoffel P S Badenhorst; Uwe T Bornscheuer
Journal:  ChemCatChem       Date:  2020-01-31       Impact factor: 5.686

3.  Structural Analysis of the Ancestral Haloalkane Dehalogenase AncLinB-DmbA.

Authors:  Andrii Mazur; Pavel Grinkevich; Radka Chaloupkova; Petra Havlickova; Barbora Kascakova; Michal Kuty; Jiri Damborsky; Ivana Kuta Smatanova; Tatyana Prudnikova
Journal:  Int J Mol Sci       Date:  2021-11-05       Impact factor: 5.923

4.  Pathogen exposure leads to a transcriptional downregulation of core cellular functions that may dampen the immune response in a macroalga.

Authors:  Jennifer Hudson; Nandan Deshpande; Catherine Leblanc; Suhelen Egan
Journal:  Mol Ecol       Date:  2022-05-04       Impact factor: 6.622

  4 in total

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