Literature DB >> 29907304

Engineering synthetic regulatory circuits in plants.

Tessema K Kassaw1, Alberto J Donayre-Torres1, Mauricio S Antunes1, Kevin J Morey1, June I Medford2.   

Abstract

Plant synthetic biology is a rapidly emerging field that aims to engineer genetic circuits to function in plants with the same reliability and precision as electronic circuits. These circuits can be used to program predictable plant behavior, producing novel traits to improve crop plant productivity, enable biosensors, and serve as platforms to synthesize chemicals and complex biomolecules. Herein we introduce the importance of developing orthogonal plant parts and the need for quantitative part characterization for mathematical modeling of complex circuits. In particular, transfer functions are important when designing electronic-like genetic controls such as toggle switches, positive/negative feedback loops, and Boolean logic gates. We then discuss potential constraints and challenges in synthetic regulatory circuit design and integration when using plants. Finally, we highlight current and potential plant synthetic regulatory circuit applications.
Copyright © 2018 Elsevier B.V. All rights reserved.

Keywords:  Genetic circuit; Mathematical modeling; Orthogonal; Plant synthetic biology; Synthetic biology; Transfer function

Mesh:

Year:  2018        PMID: 29907304     DOI: 10.1016/j.plantsci.2018.04.005

Source DB:  PubMed          Journal:  Plant Sci        ISSN: 0168-9452            Impact factor:   4.729


  9 in total

1.  Changing Form and Function through Carotenoids and Synthetic Biology.

Authors:  Eleanore T Wurtzel
Journal:  Plant Physiol       Date:  2018-10-25       Impact factor: 8.340

Review 2.  Engineering Strategies to Boost Crop Productivity by Cutting Respiratory Carbon Loss.

Authors:  Jeffrey S Amthor; Arren Bar-Even; Andrew D Hanson; A Harvey Millar; Mark Stitt; Lee J Sweetlove; Stephen D Tyerman
Journal:  Plant Cell       Date:  2019-01-22       Impact factor: 11.277

Review 3.  Prospects of genetics and breeding for low-phosphate tolerance: an integrated approach from soil to cell.

Authors:  Jonathan Odilón Ojeda-Rivera; Gerardo Alejo-Jacuinde; Héctor-Rogelio Nájera-González; Damar López-Arredondo
Journal:  Theor Appl Genet       Date:  2022-05-07       Impact factor: 5.699

4.  Editorial: Systems Biology and Synthetic Biology in Relation to Drought Tolerance or Avoidance in Plants.

Authors:  Xiaohan Yang; John C Cushman; Anne M Borland; Qingchang Liu
Journal:  Front Plant Sci       Date:  2020-04-09       Impact factor: 5.753

Review 5.  A Fruitful Decade Using Synthetic Promoters in the Improvement of Transgenic Plants.

Authors:  Sajid Ali; Won-Chan Kim
Journal:  Front Plant Sci       Date:  2019-11-01       Impact factor: 5.753

Review 6.  Engineering Multiple Abiotic Stress Tolerance in Canola, Brassica napus.

Authors:  Neeta Lohani; Divya Jain; Mohan B Singh; Prem L Bhalla
Journal:  Front Plant Sci       Date:  2020-02-25       Impact factor: 5.753

Review 7.  Plant cell cultures as heterologous bio-factories for secondary metabolite production.

Authors:  Tong Wu; Sandra M Kerbler; Alisdair R Fernie; Youjun Zhang
Journal:  Plant Commun       Date:  2021-08-23

8.  Orthogonal control of gene expression in plants using synthetic promoters and CRISPR-based transcription factors.

Authors:  Shaunak Kar; Yogendra Bordiya; Nestor Rodriguez; Junghyun Kim; Elizabeth C Gardner; Jimmy D Gollihar; Sibum Sung; Andrew D Ellington
Journal:  Plant Methods       Date:  2022-03-29       Impact factor: 4.993

9.  A memory switch for plant synthetic biology based on the phage ϕC31 integration system.

Authors:  Joan Miquel Bernabé-Orts; Alfredo Quijano-Rubio; Marta Vazquez-Vilar; Javier Mancheño-Bonillo; Victor Moles-Casas; Sara Selma; Silvia Gianoglio; Antonio Granell; Diego Orzaez
Journal:  Nucleic Acids Res       Date:  2020-04-06       Impact factor: 16.971

  9 in total

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