Literature DB >> 29900705

Automated classification of multiphoton microscopy images of ovarian tissue using deep learning.

Mikko J Huttunen1,2, Abdurahman Hassan1, Curtis W McCloskey3,4, Sijyl Fasih1, Jeremy Upham1, Barbara C Vanderhyden3,4, Robert W Boyd1,5, Sangeeta Murugkar6.   

Abstract

Histopathological image analysis of stained tissue slides is routinely used in tumor detection and classification. However, diagnosis requires a highly trained pathologist and can thus be time-consuming, labor-intensive, and potentially risk bias. Here, we demonstrate a potential complementary approach for diagnosis. We show that multiphoton microscopy images from unstained, reproductive tissues can be robustly classified using deep learning techniques. We fine-train four pretrained convolutional neural networks using over 200 murine tissue images based on combined second-harmonic generation and two-photon excitation fluorescence contrast, to classify the tissues either as healthy or associated with high-grade serous carcinoma with over 95% sensitivity and 97% specificity. Our approach shows promise for applications involving automated disease diagnosis. It could also be readily applied to other tissues, diseases, and related classification problems. (2018) COPYRIGHT Society of Photo-Optical Instrumentation Engineers (SPIE).

Entities:  

Keywords:  convolutional neural networks; medical and biological imaging; nonlinear microscopy; optical pathology; ovarian cancer; tissue characterization

Mesh:

Year:  2018        PMID: 29900705     DOI: 10.1117/1.JBO.23.6.066002

Source DB:  PubMed          Journal:  J Biomed Opt        ISSN: 1083-3668            Impact factor:   3.170


  10 in total

1.  Multiphoton microscopy of the dermoepidermal junction and automated identification of dysplastic tissues with deep learning.

Authors:  Mikko J Huttunen; Radu Hristu; Adrian Dumitru; Iustin Floroiu; Mariana Costache; Stefan G Stanciu
Journal:  Biomed Opt Express       Date:  2019-12-10       Impact factor: 3.732

Review 2.  Artificial intelligence and machine learning in precision and genomic medicine.

Authors:  Sameer Quazi
Journal:  Med Oncol       Date:  2022-06-15       Impact factor: 3.738

3.  Analysis on the Characterization of Multiphoton Microscopy Images for Malignant Neoplastic Colon Lesion Detection under Deep Learning Methods.

Authors:  Elena Terradillos; Cristina L Saratxaga; Sara Mattana; Riccardo Cicchi; Francesco S Pavone; Nagore Andraka; Benjamin J Glover; Nagore Arbide; Jacques Velasco; Mª Carmen Etxezarraga; Artzai Picon
Journal:  J Pathol Inform       Date:  2021-06-30

4.  TAIM: Tool for Analyzing Root Images to Calculate the Infection Rate of Arbuscular Mycorrhizal Fungi.

Authors:  Kaoru Muta; Shiho Takata; Yuzuko Utsumi; Atsushi Matsumura; Masakazu Iwamura; Koichi Kise
Journal:  Front Plant Sci       Date:  2022-05-03       Impact factor: 6.627

Review 5.  Transfer learning for medical image classification: a literature review.

Authors:  Mate E Maros; Thomas Ganslandt; Hee E Kim; Alejandro Cosa-Linan; Nandhini Santhanam; Mahboubeh Jannesari
Journal:  BMC Med Imaging       Date:  2022-04-13       Impact factor: 1.930

6.  Label-Free Identification of Early Stages of Breast Ductal Carcinoma via Multiphoton Microscopy.

Authors:  Zhong Chen; Wenhui Guo; Deyong Kang; Shu Wang; Liqin Zheng; Gangqin Xi; Yuane Lian; Chuan Wang; Jianxin Chen
Journal:  Scanning       Date:  2020-04-02       Impact factor: 1.932

7.  A deep hybrid learning pipeline for accurate diagnosis of ovarian cancer based on nuclear morphology.

Authors:  Duhita Sengupta; Sk Nishan Ali; Aditya Bhattacharya; Joy Mustafi; Asima Mukhopadhyay; Kaushik Sengupta
Journal:  PLoS One       Date:  2022-01-07       Impact factor: 3.240

Review 8.  Deep learning-based image processing in optical microscopy.

Authors:  Sindhoora Kaniyala Melanthota; Dharshini Gopal; Shweta Chakrabarti; Anirudh Ameya Kashyap; Raghu Radhakrishnan; Nirmal Mazumder
Journal:  Biophys Rev       Date:  2022-04-06

9.  Automatic Detection and Segmentation of Ovarian Cancer Using a Multitask Model in Pelvic CT Images.

Authors:  Xun Wang; Hanlin Li; Pan Zheng
Journal:  Oxid Med Cell Longev       Date:  2022-10-11       Impact factor: 7.310

10.  Non-disruptive collagen characterization in clinical histopathology using cross-modality image synthesis.

Authors:  Adib Keikhosravi; Bin Li; Yuming Liu; Matthew W Conklin; Agnes G Loeffler; Kevin W Eliceiri
Journal:  Commun Biol       Date:  2020-07-31
  10 in total

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