Literature DB >> 29899680

Causal Discovery from Temporally Aggregated Time Series.

Mingming Gong1,2, Kun Zhang2, Bernhard Schölkopf3, Clark Glymour2, Dacheng Tao4.   

Abstract

Discovering causal structure of a dynamical system from observed time series is a traditional and important problem. In many practical applications, observed data are obtained by applying subsampling or temporally aggregation to the original causal processes, making it difficult to discover the underlying causal relations. Subsampling refers to the procedure that for every k consecutive observations, one is kept, the rest being skipped, and recently some advances have been made in causal discovery from such data. With temporal aggregation, the local averages or sums of k consecutive, non-overlapping observations in the causal process are computed as new observations, and causal discovery from such data is even harder. In this paper, we investigate how to recover causal relations at the original causal frequency from temporally aggregated data when k is known. Assuming the time series at the causal frequency follows a vector autoregressive (VAR) model, we show that the causal structure at the causal frequency is identifiable from aggregated time series if the noise terms are independent and non-Gaussian and some other technical conditions hold. We then present an estimation method based on non-Gaussian state-space modeling and evaluate its performance on both synthetic and real data.

Entities:  

Year:  2017        PMID: 29899680      PMCID: PMC5995575     

Source DB:  PubMed          Journal:  Uncertain Artif Intell        ISSN: 1525-3384


  4 in total

1.  Causal Discovery from Subsampled Time Series Data by Constraint Optimization.

Authors:  Antti Hyttinen; Sergey Plis; Matti Järvisalo; Frederick Eberhardt; David Danks
Journal:  JMLR Workshop Conf Proc       Date:  2016-08

2.  Analysis of sampling artifacts on the Granger causality analysis for topology extraction of neuronal dynamics.

Authors:  Douglas Zhou; Yaoyu Zhang; Yanyang Xiao; David Cai
Journal:  Front Comput Neurosci       Date:  2014-07-30       Impact factor: 2.380

3.  Mesochronal Structure Learning.

Authors:  Sergey Plis; David Danks; Jianyu Yang
Journal:  Uncertain Artif Intell       Date:  2015-07-12

4.  Rate-Agnostic (Causal) Structure Learning.

Authors:  Sergey Plis; David Danks; Cynthia Freeman; Vince Calhoun
Journal:  Adv Neural Inf Process Syst       Date:  2015-12
  4 in total
  3 in total

Review 1.  Data-driven causal analysis of observational biological time series.

Authors:  Alex Eric Yuan; Wenying Shou
Journal:  Elife       Date:  2022-08-19       Impact factor: 8.713

2.  Learning causality and causality-related learning: some recent progress.

Authors:  Kun Zhang; Bernhard Schölkopf; Peter Spirtes; Clark Glymour
Journal:  Natl Sci Rev       Date:  2017-11-17       Impact factor: 17.275

3.  Causal Discovery and Forecasting in Nonstationary Environments with State-Space Models.

Authors:  Biwei Huang; Kun Zhang; Mingming Gong; Clark Glymour
Journal:  Proc Mach Learn Res       Date:  2019-06
  3 in total

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