Literature DB >> 29892692

JDFTx: software for joint density-functional theory.

Ravishankar Sundararaman1, Kendra Letchworth-Weaver2, Kathleen A Schwarz3, Deniz Gunceler4, Yalcin Ozhabes4, T A Arias4.   

Abstract

Density-functional theory (DFT) has revolutionized computational prediction of atomic-scale properties from first principles in physics, chemistry and materials science. Continuing development of new methods is necessary for accurate predictions of new classes of materials and properties, and for connecting to nano- and mesoscale properties using coarse-grained theories. JDFTx is a fully-featured open-source electronic DFT software designed specifically to facilitate rapid development of new theories, models and algorithms. Using an algebraic formulation as an abstraction layer, compact C++11 code automatically performs well on diverse hardware including GPUs (Graphics Processing Units). This code hosts the development of joint density-functional theory (JDFT) that combines electronic DFT with classical DFT and continuum models of liquids for first-principles calculations of solvated and electrochemical systems. In addition, the modular nature of the code makes it easy to extend and interface with, facilitating the development of multi-scale toolkits that connect to ab initio calculations, e.g. photo-excited carrier dynamics combining electron and phonon calculations with electromagnetic simulations.

Entities:  

Keywords:  31.15.A-; 72.20.Ht; 73.20.Mf; 82.20.Yn; 82.45.Jn; Density functional theory; Electrochemistry; Electronic structure; Light-matter interactions; Solvation

Year:  2017        PMID: 29892692      PMCID: PMC5992620          DOI: 10.1016/j.softx.2017.10.006

Source DB:  PubMed          Journal:  SoftwareX


  37 in total

1.  Generalized Gradient Approximation Made Simple.

Authors: 
Journal:  Phys Rev Lett       Date:  1996-10-28       Impact factor: 9.161

2.  Influence of the exchange screening parameter on the performance of screened hybrid functionals.

Authors:  Aliaksandr V Krukau; Oleg A Vydrov; Artur F Izmaylov; Gustavo E Scuseria
Journal:  J Chem Phys       Date:  2006-12-14       Impact factor: 3.488

3.  Semiempirical GGA-type density functional constructed with a long-range dispersion correction.

Authors:  Stefan Grimme
Journal:  J Comput Chem       Date:  2006-11-30       Impact factor: 3.376

4.  Workhorse semilocal density functional for condensed matter physics and quantum chemistry.

Authors:  John P Perdew; Adrienn Ruzsinszky; Gábor I Csonka; Lucian A Constantin; Jianwei Sun
Journal:  Phys Rev Lett       Date:  2009-07-10       Impact factor: 9.161

5.  Continuum variational and diffusion quantum Monte Carlo calculations.

Authors:  R J Needs; M D Towler; N D Drummond; P López Ríos
Journal:  J Phys Condens Matter       Date:  2009-12-10       Impact factor: 2.333

6.  QUANTUM ESPRESSO: a modular and open-source software project for quantum simulations of materials.

Authors:  Paolo Giannozzi; Stefano Baroni; Nicola Bonini; Matteo Calandra; Roberto Car; Carlo Cavazzoni; Davide Ceresoli; Guido L Chiarotti; Matteo Cococcioni; Ismaila Dabo; Andrea Dal Corso; Stefano de Gironcoli; Stefano Fabris; Guido Fratesi; Ralph Gebauer; Uwe Gerstmann; Christos Gougoussis; Anton Kokalj; Michele Lazzeri; Layla Martin-Samos; Nicola Marzari; Francesco Mauri; Riccardo Mazzarello; Stefano Paolini; Alfredo Pasquarello; Lorenzo Paulatto; Carlo Sbraccia; Sandro Scandolo; Gabriele Sclauzero; Ari P Seitsonen; Alexander Smogunov; Paolo Umari; Renata M Wentzcovitch
Journal:  J Phys Condens Matter       Date:  2009-09-01       Impact factor: 2.333

7.  Weighted-density functionals for cavity formation and dispersion energies in continuum solvation models.

Authors:  Ravishankar Sundararaman; Deniz Gunceler; T A Arias
Journal:  J Chem Phys       Date:  2014-10-07       Impact factor: 3.488

8.  A recipe for free-energy functionals of polarizable molecular fluids.

Authors:  Ravishankar Sundararaman; Kendra Letchworth-Weaver; T A Arias
Journal:  J Chem Phys       Date:  2014-04-14       Impact factor: 3.488

9.  Formic acid oxidation on platinum: a simple mechanistic study.

Authors:  Kathleen A Schwarz; Ravishankar Sundararaman; Thomas P Moffat; Thomas C Allison
Journal:  Phys Chem Chem Phys       Date:  2015-07-27       Impact factor: 3.676

10.  The Reaction Mechanism with Free Energy Barriers at Constant Potentials for the Oxygen Evolution Reaction at the IrO(2) (110) Surface.

Authors:  Yuan Ping; Robert J Nielsen; William A Goddard
Journal:  J Am Chem Soc       Date:  2016-12-28       Impact factor: 15.419

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  12 in total

1.  CO2 reduction on pure Cu produces only H2 after subsurface O is depleted: Theory and experiment.

Authors:  Guiji Liu; Michelle Lee; Soonho Kwon; Guosong Zeng; Johanna Eichhorn; Aya K Buckley; F Dean Toste; William A Goddard; Francesca M Toma
Journal:  Proc Natl Acad Sci U S A       Date:  2021-06-08       Impact factor: 11.205

2.  Electrochemical Capacitance of CO-Terminated Pt(111) Dominated by the CO-Solvent Gap.

Authors:  Ravishankar Sundararaman; Marta C Figueiredo; Marc T M Koper; Kathleen A Schwarz
Journal:  J Phys Chem Lett       Date:  2017-10-20       Impact factor: 6.475

Review 3.  Water electrolysis: from textbook knowledge to the latest scientific strategies and industrial developments.

Authors:  Marian Chatenet; Bruno G Pollet; Dario R Dekel; Fabio Dionigi; Jonathan Deseure; Pierre Millet; Richard D Braatz; Martin Z Bazant; Michael Eikerling; Iain Staffell; Paul Balcombe; Yang Shao-Horn; Helmut Schäfer
Journal:  Chem Soc Rev       Date:  2022-06-06       Impact factor: 60.615

Review 4.  Implicit Solvation Methods for Catalysis at Electrified Interfaces.

Authors:  Stefan Ringe; Nicolas G Hörmann; Harald Oberhofer; Karsten Reuter
Journal:  Chem Rev       Date:  2021-12-20       Impact factor: 72.087

5.  Resolving the Geometry/Charge Puzzle of the c(2 × 2)-Cl Cu(100) Electrode.

Authors:  Kathleen Schwarz; Mitchell C Groenenboom; Thomas P Moffat; Ravishankar Sundararaman; John Vinson
Journal:  J Phys Chem Lett       Date:  2020-12-27       Impact factor: 6.475

6.  Reaction mechanism and kinetics for CO2 reduction on nickel single atom catalysts from quantum mechanics.

Authors:  Md Delowar Hossain; Yufeng Huang; Ted H Yu; William A Goddard; Zhengtang Luo
Journal:  Nat Commun       Date:  2020-05-07       Impact factor: 14.919

7.  Spin-phonon relaxation from a universal ab initio density-matrix approach.

Authors:  Junqing Xu; Adela Habib; Sushant Kumar; Feng Wu; Ravishankar Sundararaman; Yuan Ping
Journal:  Nat Commun       Date:  2020-06-03       Impact factor: 14.919

8.  Electrochemical synthesis of urea on MBenes.

Authors:  Xiaorong Zhu; Xiaocheng Zhou; Yu Jing; Yafei Li
Journal:  Nat Commun       Date:  2021-07-02       Impact factor: 14.919

9.  Quantifying the role of surface plasmon excitation and hot carrier transport in plasmonic devices.

Authors:  Giulia Tagliabue; Adam S Jermyn; Ravishankar Sundararaman; Alex J Welch; Joseph S DuChene; Ragip Pala; Artur R Davoyan; Prineha Narang; Harry A Atwater
Journal:  Nat Commun       Date:  2018-08-23       Impact factor: 14.919

10.  A chiral switchable photovoltaic ferroelectric 1D perovskite.

Authors:  Yang Hu; Fred Florio; Zhizhong Chen; W Adam Phelan; Maxime A Siegler; Zhe Zhou; Yuwei Guo; Ryan Hawks; Jie Jiang; Jing Feng; Lifu Zhang; Baiwei Wang; Yiping Wang; Daniel Gall; Edmund F Palermo; Zonghuan Lu; Xin Sun; Toh-Ming Lu; Hua Zhou; Yang Ren; Esther Wertz; Ravishankar Sundararaman; Jian Shi
Journal:  Sci Adv       Date:  2020-02-28       Impact factor: 14.136

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