Literature DB >> 29891563

Repeat-Associated Non-ATG Translation in Neurological Diseases.

Tao Zu1,2, Amrutha Pattamatta1,2, Laura P W Ranum1,2,3,4.   

Abstract

More than 40 different neurological diseases are caused by microsatellite repeat expansions that locate within translated or untranslated gene regions, including 5' and 3' untranslated regions (UTRs), introns, and protein-coding regions. Expansion mutations are transcribed bidirectionally and have been shown to give rise to proteins, which are synthesized from three reading frames in the absence of an AUG initiation codon through a novel process called repeat-associated non-ATG (RAN) translation. RAN proteins, which were first described in spinocerebellar ataxia type 8 (SCA8) and myotonic dystrophy type 1 (DM1), have now been reported in a growing list of microsatellite expansion diseases. This article reviews what is currently known about RAN proteins in microsatellite expansion diseases and experiments that provide clues on how RAN translation is regulated.
Copyright © 2018 Cold Spring Harbor Laboratory Press; all rights reserved.

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Year:  2018        PMID: 29891563      PMCID: PMC6280704          DOI: 10.1101/cshperspect.a033019

Source DB:  PubMed          Journal:  Cold Spring Harb Perspect Biol        ISSN: 1943-0264            Impact factor:   10.005


  76 in total

1.  [Double the trouble: bidirectional expression of the SCA8 CAG/CTG expansion mutation - evidence for RNA and protein gain of function effects].

Authors:  Laura P W Ranum; Randy S Daughters; Daniel L Tuttle; Wangcai Gao; Yoshio Ikeda; Melinda L Moseley; Tim Ebner; Maurice S Swanson
Journal:  Rinsho Shinkeigaku       Date:  2010-11

2.  The disease-associated r(GGGGCC)n repeat from the C9orf72 gene forms tract length-dependent uni- and multimolecular RNA G-quadruplex structures.

Authors:  Kaalak Reddy; Bita Zamiri; Sabrina Y R Stanley; Robert B Macgregor; Christopher E Pearson
Journal:  J Biol Chem       Date:  2013-02-19       Impact factor: 5.157

Review 3.  Partners in crime: bidirectional transcription in unstable microsatellite disease.

Authors:  Ranjan Batra; Konstantinos Charizanis; Maurice S Swanson
Journal:  Hum Mol Genet       Date:  2010-04-04       Impact factor: 6.150

4.  RNA structure of trinucleotide repeats associated with human neurological diseases.

Authors:  Krzysztof Sobczak; Mateusz de Mezer; Gracjan Michlewski; Jacek Krol; Wlodzimierz J Krzyzosiak
Journal:  Nucleic Acids Res       Date:  2003-10-01       Impact factor: 16.971

5.  Aberrant splicing of HTT generates the pathogenic exon 1 protein in Huntington disease.

Authors:  Kirupa Sathasivam; Andreas Neueder; Theresa A Gipson; Christian Landles; Agnesska C Benjamin; Marie K Bondulich; Donna L Smith; Richard L M Faull; Raymund A C Roos; David Howland; Peter J Detloff; David E Housman; Gillian P Bates
Journal:  Proc Natl Acad Sci U S A       Date:  2013-01-22       Impact factor: 11.205

Review 6.  IRES-induced conformational changes in the ribosome and the mechanism of translation initiation by internal ribosomal entry.

Authors:  Christopher U T Hellen
Journal:  Biochim Biophys Acta       Date:  2009-06-17

7.  GGGGCC repeat expansion in C9orf72 compromises nucleocytoplasmic transport.

Authors:  Brian D Freibaum; Yubing Lu; Rodrigo Lopez-Gonzalez; Nam Chul Kim; Sandra Almeida; Kyung-Ha Lee; Nisha Badders; Marc Valentine; Bruce L Miller; Philip C Wong; Leonard Petrucelli; Hong Joo Kim; Fen-Biao Gao; J Paul Taylor
Journal:  Nature       Date:  2015-08-26       Impact factor: 49.962

8.  C9orf72 BAC Transgenic Mice Display Typical Pathologic Features of ALS/FTD.

Authors:  Jacqueline G O'Rourke; Laurent Bogdanik; A K M G Muhammad; Tania F Gendron; Kevin J Kim; Andrew Austin; Janet Cady; Elaine Y Liu; Jonah Zarrow; Sharday Grant; Ritchie Ho; Shaughn Bell; Sharon Carmona; Megan Simpkinson; Deepti Lall; Kathryn Wu; Lillian Daughrity; Dennis W Dickson; Matthew B Harms; Leonard Petrucelli; Edward B Lee; Cathleen M Lutz; Robert H Baloh
Journal:  Neuron       Date:  2015-12-02       Impact factor: 17.173

9.  A hexanucleotide repeat expansion in C9ORF72 is the cause of chromosome 9p21-linked ALS-FTD.

Authors:  Alan E Renton; Elisa Majounie; Adrian Waite; Javier Simón-Sánchez; Sara Rollinson; J Raphael Gibbs; Jennifer C Schymick; Hannu Laaksovirta; John C van Swieten; Liisa Myllykangas; Hannu Kalimo; Anders Paetau; Yevgeniya Abramzon; Anne M Remes; Alice Kaganovich; Sonja W Scholz; Jamie Duckworth; Jinhui Ding; Daniel W Harmer; Dena G Hernandez; Janel O Johnson; Kin Mok; Mina Ryten; Danyah Trabzuni; Rita J Guerreiro; Richard W Orrell; James Neal; Alex Murray; Justin Pearson; Iris E Jansen; David Sondervan; Harro Seelaar; Derek Blake; Kate Young; Nicola Halliwell; Janis Bennion Callister; Greg Toulson; Anna Richardson; Alex Gerhard; Julie Snowden; David Mann; David Neary; Michael A Nalls; Terhi Peuralinna; Lilja Jansson; Veli-Matti Isoviita; Anna-Lotta Kaivorinne; Maarit Hölttä-Vuori; Elina Ikonen; Raimo Sulkava; Michael Benatar; Joanne Wuu; Adriano Chiò; Gabriella Restagno; Giuseppe Borghero; Mario Sabatelli; David Heckerman; Ekaterina Rogaeva; Lorne Zinman; Jeffrey D Rothstein; Michael Sendtner; Carsten Drepper; Evan E Eichler; Can Alkan; Ziedulla Abdullaev; Svetlana D Pack; Amalia Dutra; Evgenia Pak; John Hardy; Andrew Singleton; Nigel M Williams; Peter Heutink; Stuart Pickering-Brown; Huw R Morris; Pentti J Tienari; Bryan J Traynor
Journal:  Neuron       Date:  2011-09-21       Impact factor: 17.173

10.  SRSF1-dependent nuclear export inhibition of C9ORF72 repeat transcripts prevents neurodegeneration and associated motor deficits.

Authors:  Guillaume M Hautbergue; Lydia M Castelli; Laura Ferraiuolo; Alvaro Sanchez-Martinez; Johnathan Cooper-Knock; Adrian Higginbottom; Ya-Hui Lin; Claudia S Bauer; Jennifer E Dodd; Monika A Myszczynska; Sarah M Alam; Pierre Garneret; Jayanth S Chandran; Evangelia Karyka; Matthew J Stopford; Emma F Smith; Janine Kirby; Kathrin Meyer; Brian K Kaspar; Adrian M Isaacs; Sherif F El-Khamisy; Kurt J De Vos; Ke Ning; Mimoun Azzouz; Alexander J Whitworth; Pamela J Shaw
Journal:  Nat Commun       Date:  2017-07-05       Impact factor: 14.919

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  15 in total

Review 1.  Repeat-associated RNA structure and aberrant splicing.

Authors:  Melissa A Hale; Nicholas E Johnson; J Andrew Berglund
Journal:  Biochim Biophys Acta Gene Regul Mech       Date:  2019-07-16       Impact factor: 4.490

Review 2.  The Integrated Stress Response and Phosphorylated Eukaryotic Initiation Factor 2α in Neurodegeneration.

Authors:  Sarah Bond; Claudia Lopez-Lloreda; Patrick J Gannon; Cagla Akay-Espinoza; Kelly L Jordan-Sciutto
Journal:  J Neuropathol Exp Neurol       Date:  2020-02-01       Impact factor: 3.685

3.  Differential toxicity of ataxin-3 isoforms in Drosophila models of Spinocerebellar Ataxia Type 3.

Authors:  Sean L Johnson; Jessica R Blount; Kozeta Libohova; Bedri Ranxhi; Henry L Paulson; Wei-Ling Tsou; Sokol V Todi
Journal:  Neurobiol Dis       Date:  2019-07-13       Impact factor: 5.996

Review 4.  Translational Control in the Brain in Health and Disease.

Authors:  Wayne S Sossin; Mauro Costa-Mattioli
Journal:  Cold Spring Harb Perspect Biol       Date:  2019-08-01       Impact factor: 10.005

5.  Smcr8 deficiency disrupts axonal transport-dependent lysosomal function and promotes axonal swellings and gain of toxicity in C9ALS/FTD mouse models.

Authors:  Chen Liang; Qiang Shao; Wei Zhang; Mei Yang; Qing Chang; Rong Chen; Jian-Fu Chen
Journal:  Hum Mol Genet       Date:  2019-12-01       Impact factor: 6.150

6.  DDX3X and specific initiation factors modulate FMR1 repeat-associated non-AUG-initiated translation.

Authors:  Alexander E Linsalata; Fang He; Ahmed M Malik; Mary Rebecca Glineburg; Katelyn M Green; Sam Natla; Brittany N Flores; Amy Krans; Hilary C Archbold; Stephen J Fedak; Sami J Barmada; Peter K Todd
Journal:  EMBO Rep       Date:  2019-07-25       Impact factor: 9.071

Review 7.  Non-AUG translation initiation in mammals.

Authors:  Dmitry E Andreev; Gary Loughran; Alla D Fedorova; Maria S Mikhaylova; Ivan N Shatsky; Pavel V Baranov
Journal:  Genome Biol       Date:  2022-05-09       Impact factor: 17.906

Review 8.  Translational control in aging and neurodegeneration.

Authors:  Geena Skariah; Peter K Todd
Journal:  Wiley Interdiscip Rev RNA       Date:  2020-09-20       Impact factor: 9.349

9.  eIF4B and eIF4H mediate GR production from expanded G4C2 in a Drosophila model for C9orf72-associated ALS.

Authors:  Lindsey D Goodman; Mercedes Prudencio; Ananth R Srinivasan; Olivia M Rifai; Virginia M-Y Lee; Leonard Petrucelli; Nancy M Bonini
Journal:  Acta Neuropathol Commun       Date:  2019-04-25       Impact factor: 7.578

10.  C9orf72 deficiency promotes motor deficits of a C9ALS/FTD mouse model in a dose-dependent manner.

Authors:  Qiang Shao; Chen Liang; Qing Chang; Wei Zhang; Mei Yang; Jian-Fu Chen
Journal:  Acta Neuropathol Commun       Date:  2019-03-04       Impact factor: 7.801

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