Literature DB >> 29881919

From underlying chemistry to therapeutic potential: open questions in the new field of lysine polyphosphorylation.

Amanda Bentley-DeSousa1,2, Michael Downey3,4.   

Abstract

Polyphosphorylation is a newly described non-enzymatic post-translational modification wherein long chains of inorganic phosphates are attached to lysine residues. The first targets of polyphosphorylation identified were S. cerevisiae proteins Nsr1 and Top1. Building on this theme, we recently exploited functional genomics tools in yeast to identify 15 new targets, including a conserved network of nucleolar proteins implicated in ribosome biogenesis. We also described the polyphosphorylation of six human proteins, suggesting that this unique post-translational modification could be conserved throughout eukaryotes. The study of polyphosphorylation seems poised to uncover novel modes of protein regulation in pathways spanning diverse biological processes. In this review, we establish a framework for future work by outlining critical questions related to the biochemistry of polyphosphorylation, its therapeutic potential, and everything in between.

Entities:  

Keywords:  EcPPK1; Lysine polyphosphorylation; PolyP; Ppn1; Ppn2; Ppx1; Vtc4

Mesh:

Substances:

Year:  2018        PMID: 29881919     DOI: 10.1007/s00294-018-0854-4

Source DB:  PubMed          Journal:  Curr Genet        ISSN: 0172-8083            Impact factor:   3.886


  64 in total

1.  Polyphosphate elicits pro-inflammatory responses that are counteracted by activated protein C in both cellular and animal models.

Authors:  J-S Bae; W Lee; A R Rezaie
Journal:  J Thromb Haemost       Date:  2012-06       Impact factor: 5.824

2.  Factor XII promotes blood coagulation independent of factor XI in the presence of long-chain polyphosphates.

Authors:  C Puy; E I Tucker; Z C Wong; D Gailani; S A Smith; S H Choi; J H Morrissey; A Gruber; O J T McCarty
Journal:  J Thromb Haemost       Date:  2013-07       Impact factor: 5.824

3.  Direct labeling of polyphosphate at the ultrastructural level in Saccharomyces cerevisiae by using the affinity of the polyphosphate binding domain of Escherichia coli exopolyphosphatase.

Authors:  Katsuharu Saito; Ryo Ohtomo; Yukari Kuga-Uetake; Toshihiro Aono; Masanori Saito
Journal:  Appl Environ Microbiol       Date:  2005-10       Impact factor: 4.792

4.  High negative charge-to-size ratio in polyphosphates and heparin regulates factor VII-activating protease.

Authors:  Lars Muhl; Sebastian P Galuska; Katariina Oörni; Laura Hernández-Ruiz; Luminita-Cornelia Andrei-Selmer; Rudolf Geyer; Klaus T Preissner; Felix A Ruiz; Petri T Kovanen; Sandip M Kanse
Journal:  FEBS J       Date:  2009-07-31       Impact factor: 5.542

5.  Polyphosphate colocalizes with factor XII on platelet-bound fibrin and augments its plasminogen activator activity.

Authors:  Joanne L Mitchell; Ausra S Lionikiene; Georgi Georgiev; Anja Klemmer; Chelsea Brain; Paul Y Kim; Nicola J Mutch
Journal:  Blood       Date:  2016-09-30       Impact factor: 22.113

6.  Polyphosphates inhibit extracellular matrix mineralization in MC3T3-E1 osteoblast cultures.

Authors:  Betty Hoac; Tina Kiffer-Moreira; José Luis Millán; Marc D McKee
Journal:  Bone       Date:  2013-01-19       Impact factor: 4.398

7.  Human platelet dense granules contain polyphosphate and are similar to acidocalcisomes of bacteria and unicellular eukaryotes.

Authors:  Felix A Ruiz; Christopher R Lea; Eric Oldfield; Roberto Docampo
Journal:  J Biol Chem       Date:  2004-08-11       Impact factor: 5.157

8.  Protein polyphosphorylation of lysine residues by inorganic polyphosphate.

Authors:  Cristina Azevedo; Thomas Livermore; Adolfo Saiardi
Journal:  Mol Cell       Date:  2015-03-12       Impact factor: 17.970

9.  Artificial Dense Granules: A Procoagulant Liposomal Formulation Modeled after Platelet Polyphosphate Storage Pools.

Authors:  Alexander J Donovan; Joseph Kalkowski; Magdalena Szymusiak; Canhui Wang; Stephanie A Smith; Robert F Klie; James H Morrissey; Ying Liu
Journal:  Biomacromolecules       Date:  2016-07-27       Impact factor: 6.988

10.  Acetylation dynamics and stoichiometry in Saccharomyces cerevisiae.

Authors:  Brian T Weinert; Vytautas Iesmantavicius; Tarek Moustafa; Christian Schölz; Sebastian A Wagner; Christoph Magnes; Rudolf Zechner; Chunaram Choudhary
Journal:  Mol Syst Biol       Date:  2014-01-30       Impact factor: 11.429

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  5 in total

1.  A reciprocal translocation involving Aspergillus nidulans snxAHrb1/Gbp2 and gyfA uncovers a new regulator of the G2-M transition and reveals a role in transcriptional repression for the setBSet2 histone H3-lysine-36 methyltransferase.

Authors:  Steven W James; Jonathan Palmer; Nancy P Keller; Morgan L Brown; Matthew R Dunworth; Sarah G Francisco; Katherine G Watson; Breanna Titchen; Alecia Achimovich; Andrew Mahoney; Joseph P Artemiou; Kyra G Buettner; Madelyn Class; Andrew L Sydenstricker; Sarah Lea Anglin
Journal:  Genetics       Date:  2022-09-30       Impact factor: 4.402

2.  Metabolic control of acclimation to nutrient deprivation dependent on polyphosphate synthesis.

Authors:  E Sanz-Luque; S Saroussi; W Huang; N Akkawi; A R Grossman
Journal:  Sci Adv       Date:  2020-09-30       Impact factor: 14.136

3.  Ddp1 Cooperates with Ppx1 to Counter a Stress Response Initiated by Nonvacuolar Polyphosphate.

Authors:  Liam McCarthy; Iryna Abramchuk; Gamal Wafy; Alix Denoncourt; Mathieu Lavallée-Adam; Michael Downey
Journal:  mBio       Date:  2022-07-07       Impact factor: 7.786

4.  Strong anion exchange-mediated phosphoproteomics reveals extensive human non-canonical phosphorylation.

Authors:  Gemma Hardman; Simon Perkins; Philip J Brownridge; Christopher J Clarke; Dominic P Byrne; Amy E Campbell; Anton Kalyuzhnyy; Ashleigh Myall; Patrick A Eyers; Andrew R Jones; Claire E Eyers
Journal:  EMBO J       Date:  2019-08-21       Impact factor: 11.598

5.  Targeting Polyphosphate Kinases in the Fight against Pseudomonas aeruginosa.

Authors:  Kanchi Baijal; Michael Downey
Journal:  mBio       Date:  2021-08-03       Impact factor: 7.867

  5 in total

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