Literature DB >> 2987848

Structure and function of the region of the replication origin of the Bacillus subtilis chromosome. IV. Transcription of the oriC region and expression of DNA gyrase genes and other open reading frames.

N Ogasawara, S Moriya, H Yoshikawa.   

Abstract

We have determined nucleotide sequence of some 10,000 base pairs (bp) in the oriC region of the Bacillus subtilis chromosome. Initiation sites of transcription from this region were determined in vivo by the S1-mapping method. Five major initiation sites were found in the leader sequences of five open reading frames (ORF) deduced from the nucleotide sequence. The sixth site is located inside the ORF323("recF"). Putative promoters were found for each transcript. Function of these promoters was demonstrated in Escherichia coli by the Maxi-cell method using appropriate fragments cloned in pBR vectors. Based on these results, genes in 10,000 bp oriC region are divided into 4 transcriptional units. GyrB composes one unit with two other ORFs, while gyrA constitutes a single unit by itself. The promoters for ORF446("dnaA") and ORF378("dnaN") are located within the putative signal sequences for oriC. Transcription from these promoters is dependent on a dna-initiation gene, dnaB.

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Year:  1985        PMID: 2987848      PMCID: PMC341154          DOI: 10.1093/nar/13.7.2267

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN: 0305-1048            Impact factor:   16.971


  18 in total

1.  Initiation of DNA replication in Bacillus subtilis. IV. The effect of an intercalating dye, ethidium bromide.

Authors:  H Yoshikawa; N Ogasawara; M Seiki
Journal:  Mol Gen Genet       Date:  1980

2.  Identification of the uvrA gene product.

Authors:  A Sancar; R P Wharton; S Seltzer; B M Kacinski; N D Clarke; W D Rupp
Journal:  J Mol Biol       Date:  1981-05-05       Impact factor: 5.469

3.  The nucleotide sequence of the dnaA gene and the first part of the dnaN gene of Escherichia coli K-12.

Authors:  E B Hansen; F G Hansen; K von Meyenburg
Journal:  Nucleic Acids Res       Date:  1982-11-25       Impact factor: 16.971

4.  Kinetics of minichromosome replication in Escherichia coli B/r.

Authors:  A C Leonard; J A Hucul; C E Helmstetter
Journal:  J Bacteriol       Date:  1982-02       Impact factor: 3.490

5.  Nucleotide sequence of the lexA gene of E. coli.

Authors:  T Horii; T Ogawa; H Ogawa
Journal:  Cell       Date:  1981-03       Impact factor: 41.582

6.  Molecular cloning of the crr gene and evidence that it is the structural gene for IIIGlc, a phosphocarrier protein of the bacterial phosphotransferase system.

Authors:  N D Meadow; D W Saffen; R P Dottin; S Roseman
Journal:  Proc Natl Acad Sci U S A       Date:  1982-04       Impact factor: 11.205

7.  Identification of a suppressor sequence for DNA replication in the replication origin region of the Bacillus subtilis chromosome.

Authors:  M Seiki; N Ogasawara; H Yoshikawa
Journal:  Proc Natl Acad Sci U S A       Date:  1982-07       Impact factor: 11.205

8.  Replication origin region of Bacillus subtilis chromosome contains two rRNA operons.

Authors:  N Ogasawara; M Seiki; H Yoshikawa
Journal:  J Bacteriol       Date:  1983-04       Impact factor: 3.490

9.  Structure and organization of rRNA operons in the region of the replication origin of the Bacillus subtilis chromosome.

Authors:  N Ogasawara; S Moriya; H Yoshikawa
Journal:  Nucleic Acids Res       Date:  1983-09-24       Impact factor: 16.971

10.  The nucleotide sequence of the dnaA gene promoter and of the adjacent rpmH gene, coding for the ribosomal protein L34, of Escherichia coli.

Authors:  F G Hansen; E B Hansen; T Atlung
Journal:  EMBO J       Date:  1982       Impact factor: 11.598

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  19 in total

1.  Novel genomic rearrangement that affects expression of the Streptococcus pyogenes streptolysin O (slo) gene.

Authors:  Dragutin J Savic; Joseph J Ferretti
Journal:  J Bacteriol       Date:  2003-03       Impact factor: 3.490

2.  Molecular cloning, genetic characterization and DNA sequence analysis of the recM region of Bacillus subtilis.

Authors:  J C Alonso; K Shirahige; N Ogasawara
Journal:  Nucleic Acids Res       Date:  1990-12-11       Impact factor: 16.971

3.  Physical distance between the site of type II DNA binding to the membrane and oriC on the Bacillus subtilis 168 chromosome.

Authors:  M Itaya; J J Laffan; N Sueoka
Journal:  J Bacteriol       Date:  1992-08       Impact factor: 3.490

4.  Molecular analysis of the Bacillus subtilis recF function.

Authors:  J C Alonso; A C Stiege
Journal:  Mol Gen Genet       Date:  1991-09

5.  Differential responses of Bacillus subtilis rRNA promoters to nutritional stress.

Authors:  Walied Samarrai; David X Liu; Ann-Marie White; Barbara Studamire; Jacob Edelstein; Anita Srivastava; Russell L Widom; Rivka Rudner
Journal:  J Bacteriol       Date:  2010-11-19       Impact factor: 3.490

6.  Molecular cloning of Bacillus subtilis genes involved in DNA metabolism.

Authors:  M Perego; E Ferrari; M T Bassi; A Galizzi; P Mazza
Journal:  Mol Gen Genet       Date:  1987-08

7.  Nalidixic acid-resistant mutations of the gyrB gene of Escherichia coli.

Authors:  J Yamagishi; H Yoshida; M Yamayoshi; S Nakamura
Journal:  Mol Gen Genet       Date:  1986-09

8.  Sequence and complementation analysis of recF genes from Escherichia coli, Salmonella typhimurium, Pseudomonas putida and Bacillus subtilis: evidence for an essential phosphate binding loop.

Authors:  S J Sandler; B Chackerian; J T Li; A J Clark
Journal:  Nucleic Acids Res       Date:  1992-02-25       Impact factor: 16.971

9.  Nucleotide sequence of the recF gene cluster from Staphylococcus aureus and complementation analysis in Bacillus subtilis recF mutants.

Authors:  J C Alonso; L M Fisher
Journal:  Mol Gen Genet       Date:  1995-03-20

10.  Genetic map of the Mycoplasma genitalium chromosome.

Authors:  S N Peterson; T Lucier; K Heitzman; E A Smith; K F Bott; P C Hu; C A Hutchison
Journal:  J Bacteriol       Date:  1995-06       Impact factor: 3.490

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