Literature DB >> 29876899

A Primer in Mendelian Randomization Methodology with a Focus on Utilizing Published Summary Association Data.

Niki L Dimou1, Konstantinos K Tsilidis2,3.   

Abstract

Mendelian randomization (MR) is becoming a popular approach to estimate the causal effect of an exposure on an outcome overcoming limitations of observational epidemiology. The advent of genome-wide association studies and the increasing accumulation of summarized data from large genetic consortia make MR a powerful technique. In this review, we give a primer in MR methodology, describe efficient MR designs and analytical strategies, and focus on methods and practical guidance for conducting an MR study using summary association data. We show that the analysis is straightforward utilizing either the MR-base platform or available packages in R. However, further research is required for the development of specialized methodology to assess MR assumptions.

Entities:  

Keywords:  Causal inference; Instrumental variable; Mendelian randomization; Summarized data

Mesh:

Year:  2018        PMID: 29876899     DOI: 10.1007/978-1-4939-7868-7_13

Source DB:  PubMed          Journal:  Methods Mol Biol        ISSN: 1064-3745


  4 in total

1.  New alcohol-related genes suggest shared genetic mechanisms with neuropsychiatric disorders.

Authors:  Evangelos Evangelou; He Gao; Congying Chu; Georgios Ntritsos; Jimmy D Bell; Paul M Matthews; Adrian Rothenfluh; Sylvane Desrivières; Gunter Schumann; Paul Elliott; Paul Blakeley; Andrew R Butts; Raha Pazoki; Hideaki Suzuki; Fotios Koskeridis; Andrianos M Yiorkas; Ibrahim Karaman; Joshua Elliott; Qiang Luo; Stefanie Aeschbacher; Traci M Bartz; Sebastian E Baumeister; Peter S Braund; Michael R Brown; Jennifer A Brody; Toni-Kim Clarke; Niki Dimou; Jessica D Faul; Georg Homuth; Anne U Jackson; Katherine A Kentistou; Peter K Joshi; Rozenn N Lemaitre; Penelope A Lind; Leo-Pekka Lyytikäinen; Massimo Mangino; Yuri Milaneschi; Christopher P Nelson; Ilja M Nolte; Mia-Maria Perälä; Ozren Polasek; David Porteous; Scott M Ratliff; Jennifer A Smith; Alena Stančáková; Alexander Teumer; Samuli Tuominen; Sébastien Thériault; Jagadish Vangipurapu; John B Whitfield; Alexis Wood; Jie Yao; Bing Yu; Wei Zhao; Dan E Arking; Juha Auvinen; Chunyu Liu; Minna Männikkö; Lorenz Risch; Jerome I Rotter; Harold Snieder; Juha Veijola; Alexandra I Blakemore; Michael Boehnke; Harry Campbell; David Conen; Johan G Eriksson; Hans J Grabe; Xiuqing Guo; Pim van der Harst; Catharina A Hartman; Caroline Hayward; Andrew C Heath; Marjo-Riitta Jarvelin; Mika Kähönen; Sharon L R Kardia; Michael Kühne; Johanna Kuusisto; Markku Laakso; Jari Lahti; Terho Lehtimäki; Andrew M McIntosh; Karen L Mohlke; Alanna C Morrison; Nicholas G Martin; Albertine J Oldehinkel; Brenda W J H Penninx; Bruce M Psaty; Olli T Raitakari; Igor Rudan; Nilesh J Samani; Laura J Scott; Tim D Spector; Niek Verweij; David R Weir; James F Wilson; Daniel Levy; Ioanna Tzoulaki
Journal:  Nat Hum Behav       Date:  2019-07-29

Review 2.  Genetics of substance use disorders in the era of big data.

Authors:  Joel Gelernter; Renato Polimanti
Journal:  Nat Rev Genet       Date:  2021-07-01       Impact factor: 59.581

3.  No Casual Relationship Between T2DM and the Risk of Infectious Diseases: A Two-Sample Mendelian Randomization Study.

Authors:  Huachen Wang; Zheng Guo; Yulu Zheng; Chunyan Yu; Haifeng Hou; Bing Chen
Journal:  Front Genet       Date:  2021-08-30       Impact factor: 4.599

4.  Impact of nonrandom selection mechanisms on the causal effect estimation for two-sample Mendelian randomization methods.

Authors:  Yuanyuan Yu; Lei Hou; Xu Shi; Xiaoru Sun; Xinhui Liu; Yifan Yu; Zhongshang Yuan; Hongkai Li; Fuzhong Xue
Journal:  PLoS Genet       Date:  2022-03-17       Impact factor: 5.917

  4 in total

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