Literature DB >> 29875636

Quantitative Analysis of the Spatial Organization of Synaptic Inputs on the Postsynaptic Dendrite.

Volker Scheuss1.   

Abstract

The spatial organization of synaptic inputs on the dendritic tree of cortical neurons is considered to play an important role in the dendritic integration of synaptic activity. Active electrical properties of dendrites and mechanisms of dendritic integration have been studied for a long time. New technological developments are now enabling the characterization of the spatial organization of synaptic inputs on dendrites. However, quantitative methods for the analysis of such data are lacking. In order to place cluster parameters into the framework of dendritic integration and synaptic summation, these parameters need to be assessed rigorously in a quantitative manner. Here I present an approach for the analysis of synaptic input clusters on the dendritic tree that is based on combinatorial analysis of the likelihoods to observe specific input arrangements. This approach is superior to the commonly applied analysis of nearest neighbor distances between synaptic inputs comparing their distribution to simulations with random reshuffling or bootstrapping. First, the new approach yields exact likelihood values rather than approximate numbers obtained from simulations. Second and more importantly, the new approach identifies individual clusters and thereby allows to quantify and characterize individual cluster properties.

Entities:  

Keywords:  dendrite; dendritic integration; quantitative analysis; spatial organization; synapse cluster; synaptic input

Mesh:

Year:  2018        PMID: 29875636      PMCID: PMC5974225          DOI: 10.3389/fncir.2018.00039

Source DB:  PubMed          Journal:  Front Neural Circuits        ISSN: 1662-5110            Impact factor:   3.492


  44 in total

Review 1.  Impact of active dendrites and structural plasticity on the memory capacity of neural tissue.

Authors:  P Poirazi; B W Mel
Journal:  Neuron       Date:  2001-03       Impact factor: 17.173

2.  Locally synchronized synaptic inputs.

Authors:  Naoya Takahashi; Kazuo Kitamura; Naoki Matsuo; Mark Mayford; Masanobu Kano; Norio Matsuki; Yuji Ikegaya
Journal:  Science       Date:  2012-01-20       Impact factor: 47.728

3.  CRASP: CFP reconstitution across synaptic partners.

Authors:  Yiming Li; Aike Guo; Hao Li
Journal:  Biochem Biophys Res Commun       Date:  2015-12-10       Impact factor: 3.575

Review 4.  Synaptic clustering by dendritic signalling mechanisms.

Authors:  Matthew E Larkum; Thomas Nevian
Journal:  Curr Opin Neurobiol       Date:  2008-06       Impact factor: 6.627

5.  Dendritic coding of multiple sensory inputs in single cortical neurons in vivo.

Authors:  Zsuzsanna Varga; Hongbo Jia; Bert Sakmann; Arthur Konnerth
Journal:  Proc Natl Acad Sci U S A       Date:  2011-08-29       Impact factor: 11.205

6.  Structured synaptic connectivity between hippocampal regions.

Authors:  Shaul Druckmann; Linqing Feng; Bokyoung Lee; Chaehyun Yook; Ting Zhao; Jeffrey C Magee; Jinhyun Kim
Journal:  Neuron       Date:  2014-01-09       Impact factor: 17.173

7.  Compartmentalized versus global synaptic plasticity on dendrites controlled by experience.

Authors:  Hiroshi Makino; Roberto Malinow
Journal:  Neuron       Date:  2011-12-22       Impact factor: 17.173

Review 8.  Synaptic clustering within dendrites: an emerging theory of memory formation.

Authors:  George Kastellakis; Denise J Cai; Sara C Mednick; Alcino J Silva; Panayiota Poirazi
Journal:  Prog Neurobiol       Date:  2015-01-08       Impact factor: 11.685

9.  Clusters of synaptic inputs on dendrites of layer 5 pyramidal cells in mouse visual cortex.

Authors:  Onur Gökçe; Tobias Bonhoeffer; Volker Scheuss
Journal:  Elife       Date:  2016-07-19       Impact factor: 8.140

10.  Thalamocortical input onto layer 5 pyramidal neurons measured using quantitative large-scale array tomography.

Authors:  Jong-Cheol Rah; Erhan Bas; Jennifer Colonell; Yuriy Mishchenko; Bill Karsh; Richard D Fetter; Eugene W Myers; Dmitri B Chklovskii; Karel Svoboda; Timothy D Harris; John T R Isaac
Journal:  Front Neural Circuits       Date:  2013-11-12       Impact factor: 3.492

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