Literature DB >> 29874612

Control of Transmembrane Helix Dynamics by Interfacial Tryptophan Residues.

Matthew J McKay1, Ashley N Martfeld1, Anna A De Angelis2, Stanley J Opella2, Denise V Greathouse1, Roger E Koeppe3.   

Abstract

Transmembrane protein domains often contain interfacial aromatic residues, which may play a role in the insertion and stability of membrane helices. Residues such as Trp or Tyr, therefore, are often found situated at the lipid-water interface. We have examined the extent to which the precise radial locations of interfacial Trp residues may influence peptide helix orientation and dynamics. To address these questions, we have modified the GW5,19ALP23 (acetyl-GGALW5(LA)6LW19LAGA-[ethanol]amide) model peptide framework to relocate the Trp residues. Peptide orientation and dynamics were analyzed by means of solid-state nuclear magnetic resonance (NMR) spectroscopy to monitor specific 2H- and 15N-labeled residues. GW5,19ALP23 adopts a defined, tilted orientation within lipid bilayer membranes with minimal evidence of motional averaging of NMR observables, such as 2H quadrupolar or 15N-1H dipolar splittings. Here, we examine how peptide dynamics are impacted by relocating the interfacial Trp (W) residues on both ends and opposing faces of the helix, for example by a 100° rotation on the helical wheel for positions 4 and 20. In contrast to GW5,19ALP23, the modified GW4,20ALP23 helix experiences more extensive motional averaging of the NMR observables in several lipid bilayers of different thickness. Individual and combined Gaussian analyses of the 2H and 15N NMR signals confirm that the extent of dynamic averaging, particularly rotational "slippage" about the helix axis, is strongly coupled to the radial distribution of the interfacial Trp residues as well as the bilayer thickness. Additional 2H labels on alanines A3 and A21 reveal partial fraying of the helix ends. Even within the context of partial unwinding, the locations of particular Trp residues around the helix axis are prominent factors for determining transmembrane helix orientation and dynamics within the lipid membrane environment.
Copyright © 2018 Biophysical Society. Published by Elsevier Inc. All rights reserved.

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Year:  2018        PMID: 29874612      PMCID: PMC6129553          DOI: 10.1016/j.bpj.2018.04.016

Source DB:  PubMed          Journal:  Biophys J        ISSN: 0006-3495            Impact factor:   4.033


  5 in total

1.  Breaking the Backbone: Central Arginine Residues Induce Membrane Exit and Helix Distortions within a Dynamic Membrane Peptide.

Authors:  Matthew J McKay; Riqiang Fu; Denise V Greathouse; Roger E Koeppe
Journal:  J Phys Chem B       Date:  2019-09-17       Impact factor: 2.991

2.  Spiers Memorial Lecture: Analysis and de novo design of membrane-interactive peptides.

Authors:  Huong T Kratochvil; Robert W Newberry; Bruk Mensa; Marco Mravic; William F DeGrado
Journal:  Faraday Discuss       Date:  2021-12-24       Impact factor: 4.394

3.  Identification of a pocket factor that is critical to Zika virus assembly.

Authors:  Nadia M DiNunno; Daniel J Goetschius; Anoop Narayanan; Sydney A Majowicz; Ibrahim Moustafa; Carol M Bator; Susan L Hafenstein; Joyce Jose
Journal:  Nat Commun       Date:  2020-10-02       Impact factor: 17.694

4.  Structural and Mechanismic Studies of Lactophoricin Analog, Novel Antibacterial Peptide.

Authors:  Minseon Kim; Jinyoung Son; Yongae Kim
Journal:  Int J Mol Sci       Date:  2021-04-02       Impact factor: 5.923

5.  Lipid-Dependent Titration of Glutamic Acid at a Bilayer Membrane Interface.

Authors:  Matthew J McKay; Kelsey A Marr; Jake R Price; Denise V Greathouse; Roger E Koeppe
Journal:  ACS Omega       Date:  2021-03-17
  5 in total

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