Literature DB >> 29874459

Crystal Structure Prediction via Deep Learning.

Kevin Ryan1, Jeff Lengyel1, Michael Shatruk1.   

Abstract

We demonstrate the application of deep neural networks as a machine-learning tool for the analysis of a large collection of crystallographic data contained in the crystal structure repositories. Using input data in the form of multiperspective atomic fingerprints, which describe coordination topology around unique crystallographic sites, we show that the neural-network model can be trained to effectively distinguish chemical elements based on the topology of their crystallographic environment. The model also identifies structurally similar atomic sites in the entire data set of ∼50000 crystal structures, essentially uncovering trends that reflect the periodic table of elements. The trained model was used to analyze templates derived from the known crystal structures in order to predict the likelihood of forming new compounds that could be generated by placing elements into these structural templates in a combinatorial fashion. Statistical analysis of predictive performance of the neural-network model, which was applied to a test set of structures never seen by the model during training, indicates its ability to predict known elemental compositions with a high likelihood of success. In ∼30% of cases, the known compositions were found among the top 10 most likely candidates proposed by the model. These results suggest that the approach developed in this work can be used to effectively guide the synthetic efforts in the discovery of new materials, especially in the case of systems composed of three or more chemical elements.

Year:  2018        PMID: 29874459     DOI: 10.1021/jacs.8b03913

Source DB:  PubMed          Journal:  J Am Chem Soc        ISSN: 0002-7863            Impact factor:   15.419


  15 in total

1.  Self-supervised learning and prediction of microstructure evolution with convolutional recurrent neural networks.

Authors:  Kaiqi Yang; Yifan Cao; Youtian Zhang; Shaoxun Fan; Ming Tang; Daniel Aberg; Babak Sadigh; Fei Zhou
Journal:  Patterns (N Y)       Date:  2021-04-22

2.  Ab initio determination of crystal stability of di-p-tolyl disulfide.

Authors:  Xuan Hao; Jinfeng Liu; Imran Ali; Hongyuan Luo; Yanqiang Han; Wenxin Hu; Jinyun Liu; Xiao He; Jinjin Li
Journal:  Sci Rep       Date:  2021-03-29       Impact factor: 4.379

3.  Accelerated crystal structure prediction of multi-elements random alloy using expandable features.

Authors:  Taewon Jin; Ina Park; Taesu Park; Jaesik Park; Ji Hoon Shim
Journal:  Sci Rep       Date:  2021-03-04       Impact factor: 4.379

4.  Symmetry prediction and knowledge discovery from X-ray diffraction patterns using an interpretable machine learning approach.

Authors:  Yuta Suzuki; Hideitsu Hino; Takafumi Hawai; Kotaro Saito; Masato Kotsugi; Kanta Ono
Journal:  Sci Rep       Date:  2020-12-11       Impact factor: 4.379

5.  Deep learning approach for chemistry and processing history prediction from materials microstructure.

Authors:  Amir Abbas Kazemzadeh Farizhandi; Omar Betancourt; Mahmood Mamivand
Journal:  Sci Rep       Date:  2022-03-16       Impact factor: 4.379

6.  Sensitivity of Intra- and Intermolecular Interactions of Benzo[h]quinoline from Car-Parrinello Molecular Dynamics and Electronic Structure Inspection.

Authors:  Jarosław J Panek; Joanna Zasada; Bartłomiej M Szyja; Beata Kizior; Aneta Jezierska
Journal:  Int J Mol Sci       Date:  2021-05-14       Impact factor: 5.923

Review 7.  Computational Tools to Rationalize and Predict the Self-Assembly Behavior of Supramolecular Gels.

Authors:  Ruben Van Lommel; Wim M De Borggraeve; Frank De Proft; Mercedes Alonso
Journal:  Gels       Date:  2021-07-09

8.  Prediction Model of Organic Molecular Absorption Energies based on Deep Learning trained by Chaos-enhanced Accelerated Evolutionary algorithm.

Authors:  Mengshan Li; Suyun Lian; Fan Wang; Yanying Zhou; Bingsheng Chen; Lixin Guan; Yan Wu
Journal:  Sci Rep       Date:  2019-11-21       Impact factor: 4.379

9.  A deep-learning technique for phase identification in multiphase inorganic compounds using synthetic XRD powder patterns.

Authors:  Jin-Woong Lee; Woon Bae Park; Jin Hee Lee; Satendra Pal Singh; Kee-Sun Sohn
Journal:  Nat Commun       Date:  2020-01-03       Impact factor: 14.919

10.  Estimation and prediction of ellipsoidal molecular shapes in organic crystals based on ellipsoid packing.

Authors:  Daiki Ito; Raku Shirasawa; Yoichiro Iino; Shigetaka Tomiya; Gouhei Tanaka
Journal:  PLoS One       Date:  2020-09-30       Impact factor: 3.240

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