| Literature DB >> 29872689 |
Toshitatsu Takao1, Ryo Masumura2, Sumitaka Sakauchi2, Yoshiko Ohara1, Elif Bilgic3, Eiji Umegaki1, Hiromu Kutsumi4, Takeshi Azuma1.
Abstract
BACKGROUND AND STUDY AIMS: We developed a new reporting system based on structured data entry, which selectively extracts only endoscopic findings from endoscopists' oral statements and automatically inputs them into appropriate columns in real time during endoscopic procedures.Entities:
Year: 2018 PMID: 29872689 PMCID: PMC5985938 DOI: 10.1055/a-0579-6494
Source DB: PubMed Journal: Endosc Int Open ISSN: 2196-9736
Fig. 1Advantages and disadvantages of each entry method and entry structure and issues solved.
Fig. 2Framework of the speech recognition system we developed.
Fig. 3 The report preparation system based on structured data entry created for this study. The top column on the screen shows how the system has recognized an endoscopist’s naturally-spoken sentence. Next, the system classifies which of the recognized terms are endoscopic terminologies and enters each one of them into the appropriate columns.
Lists of findings for 21 cases with three findings per case
| Case | Findings |
| 1 | Nothing particular in the esophagus. |
| For the disease name, this finding is diagnosed as erosive gastritis. | |
| Nothing particular in the duodenum. | |
| 2 | There is no abnormal finding in the esophagus. |
| This is obviously atrophic gastritis, open type 2. | |
| There is no abnormal finding in the duodenum. | |
| 3 | Although it's mild, I diagnose this finding as a sliding hernia. |
| There are multiple hyperplastic polyps mainly in the gastric body. | |
| No abnormal finding in the duodenum. | |
| 4 | I diagnose this reflux esophagitis as grade B. |
| There is no abnormal finding in the stomach. | |
| There is erosive duodenitis in the bulb. | |
| 5 | This is reflux esophagitis, grade A. |
| I see erosive gastritis in the gastric antrum. | |
| There is extrinsic compression in the duodenal bulb. | |
| 6 | There is no abnormal finding in the esophagus. |
| This atrophic gastritis is evaluated to be closed type 2. | |
| This duodenal ulcer scar is at S2 stage. | |
| 7 | SSBE is there. |
| This lesion is a gastric ulcer, A1 stage. | |
| This duodenal ulcer is at A2 stage. | |
| 8 | I think there is no abnormal lesion in the esophagus. |
| I see a gastric ulcer scar with S2 stage. | |
| I’ll diagnose this lesion as duodenal Brunner’s gland hyperplasia. | |
| 9 | Well, nothing particular in the esophagus. |
| Billroth I reconstruction has been performed on this stomach. | |
| Okay, no lesion in the duodenum. | |
| 10 | Oh! Those are quite big esophageal varices, aren’t they? |
| It’s PHG, isn’t it? | |
| There is also periampullary diverticulum, right? | |
| 11 | Let me see, no abnormal findings in the esophagus. |
| For the disease name, I’ll call it hemorrhagic gastritis. | |
| Okay, no abnormalities in the duodenum. | |
| 12 | There is nothing abnormal in the esophagus. |
| This is obviously nodular gastritis. | |
| There is no abnormal finding in the duodenum. | |
| 13 | Although it’s mild, I diagnose this finding as a sliding hernia. |
| Possibly, this lesion is eosinophilic gastroenteritis. | |
| There is no abnormal finding in the duodenum. | |
| 14 | I diagnose this reflux esophagitis as grade B. |
| This lesion is acute gastric mucosal lesion. | |
| There is erosive duodenitis in the bulb. | |
| 15 | This finding is reflux esophagitis, grade A. |
| The stomach has Mallory-Weiss syndrome, doesn’t it? | |
| There is extrinsic compression in the duodenal bulb. | |
| 16 | There is no abnormal finding in the esophagus. |
| There is food residue in the stomach. | |
| This duodenal ulcer scar is at S2 stage. | |
| 17 | SSBE is there. |
| I see some gastric angiectasias. | |
| This duodenal ulcer is at A2 stage. | |
| 18 | I think there is no abnormal lesion in the esophagus. |
| There is a gastric submucosal tumor. | |
| I’ll diagnose this lesion as duodenal Brunner’s gland hyperplasia. | |
| 19 | Well, nothing particular in the esophagus. |
| I see gastric aberrant pancreas in the antrum. | |
| Okay, no lesions in the duodenum | |
| 20 | Oh ! There are quite big esophageal varices. |
| I suspect that this elevation is gastric GIST. | |
| There is also periampullary diverticulum, right? | |
| 21 | Let me see, no abnormal findings in the esophagus. |
| For the disease name, this finding is diagnosed as gastric lipoma. | |
| Okay, no abnormalities in the duodenum. |
Lists of findings for 21 cases with six findings per case
| Case | Findings |
| 1 | Let’s see. This reflux esophagitis is at grade A. |
| This is a mild sliding hernia. | |
| You see, there is erosive gastritis. | |
| I see several fundic gland polyps. | |
| There is an adenoma in the stomach. | |
| There is no abnormal finding in the duodenum. | |
| 2 | Okay, I’d say there is no abnormal finding in the esophagus. |
| This atrophic gastritis is categorized into open type 2. | |
| These are all gastric hyperplastic polyps. | |
| Gastric xanthoma is also seen. | |
| There is erosive duodenitis. | |
| Oh, there is also periampullary diverticulum. | |
| 3 | Mild sliding hernia is seen there. |
| Let me see, this reflux esophagitis is at grade A. | |
| Oh, SSBE is also there. | |
| There are some fundic gland polyps. | |
| This lesion is called duodenal Brunner’s gland hyperplasia. | |
| Oops, this is periampullary diverticulum, isn't it? | |
| 4 | Cough, cough. I’m sorry. This lesion is reflux esophagitis, grade B. |
| This is Candida esophagitis. | |
| This is a sliding hernia and the severity is moderate. | |
| I’ll diagnose this as erosive gastritis. | |
| Oh, there is also a submucosal tumor in the stomach. | |
| Well, this is erosive duodenitis. | |
| 5 | There is Candida esophagitis. |
| There is also solitary esophageal varix. | |
| This is Mallory-Weiss syndrome. | |
| Superficial gastritis is also seen. | |
| Erosive gastritis is there, isn’t it? | |
| There is no abnormal finding in the duodenum. | |
| 6 | Alright. There is no abnormal finding in the esophagus. |
| There is atrophic gastritis, closed type 2. | |
| This would be fine as intestinal metaplasia. | |
| Oh, I can see gastric xanthoma as well. | |
| There is a gastric telangiectasia. | |
| Oh, there is a duodenal ulcer scar at S2 stage. | |
| 7 | The esophagus is being invaded by a primary cancer of another organ. |
| The origin is advanced gastric cancer. | |
| A part of the stomach is narrowing. | |
| I see gastric carcinoid tumor as well. | |
| Atrophic gastritis, open type 3, is seen in the background mucosa. | |
| Nothing particular in the duodenum. | |
| 8 | There is no lesion in the esophagus. |
| I think I’ll classify this condition as cascade stomach. | |
| Wow, there’s an acute gastric mucosal lesion. | |
| I exchanged gastrostomy tube today. | |
| Well, this is duodenal Brunner’s gland hyperplasia. | |
| Ectopic gastric mucosa is in the duodenum. | |
| 9 | Reflux esophagitis is seen. Its grade is M. |
| A sliding hernia is also seen. It’s mild though. | |
| Also I want to say this is SSBE. | |
| I suspect that this lesion in the antrum is gastric malignant lymphoma. | |
| This lesion in the duodenum may well be GIST. | |
| The neighboring lesion is duodenal Brunner’s gland hyperplasia. | |
| 10 | There is esophageal diverticulum in the middle thoracic esophagus. |
| This patient has previously undergone a gastric ESD. | |
| As previously recognized, GAVE is still present. | |
| This patient has undergone APC therapy before. | |
| The protrusion with the recess on top is gastric aberrant pancreas. | |
| There is also periampullary diverticulum in the duodenum. | |
| 11 | Reflux esophagitis, grade A, is seen. |
| This is a mild sliding hernia. | |
| Hmm, atrophic gastritis is seen over a broad area. | |
| Some gastric hyperplastic polyps are seen. | |
| There is adenoma in the stomach. | |
| There is no abnormal lesion in the duodenum. | |
| 12 | There is no abnormal finding in the esophagus. |
| I diagnose the grade of this atrophic gastritis as open type 2. | |
| Gastric hyperplastic polyp is also seen. | |
| This is gastric ulcer scar at S2 stage. | |
| There is erosive duodenitis. | |
| There is also periampullary diverticulum. | |
| 13 | This is a mild sliding hernia. |
| This reflux esophagitis is categorized into grade A. | |
| The finding is slight, but SSBE is recognized. | |
| There is a lesion suspected as gastric MALT lymphoma. | |
| There is duodenal Brunner’s gland hyperplasia in the bulb. | |
| Periampullary diverticulum is also seen. | |
| 14 | I see reflux esophagitis, grade B. |
| This is mild Candida esophagitis. | |
| This sliding hernia is mild. | |
| I diagnose this finding as superficial gastritis for now. | |
| There is a protrusion suspected as a submucosal tumor in the stomach. | |
| Erosions are seen in the duodenum. I diagnose them as erosive duodenitis for the time being. | |
| 15 | This candida esophagitis is mild, right? |
| Solitary esophageal varix in the middle thoracic esophagus. | |
| Oh my gosh! Mallory-Weiss syndrome is seen. | |
| This patient has previously undergone a gastric ESD. | |
| Intestinal metaplasia is seen in the stomach. | |
| Nothing particular in the duodenum. | |
| 16 | Okay, there is no abnormal finding in the esophagus. |
| Atrophic gastritis, closed type 3, is seen. | |
| There is bleeding. | |
| That’s Dieulafoy’s lesion. | |
| In the stomach, there are some telangiectasias. | |
| There is a duodenal ulcer scar, S2 stage. | |
| 17 | Nothing particular in the esophagus. |
| There is large advanced cancer. | |
| A part of the stomach is narrowing. | |
| Atrophic gastritis, open type 3, is seen in the background mucosa. | |
| The stomach isn’t fully observed yet. | |
| Nothing particular in the duodenum. | |
| 18 | There is no abnormal lesion in the esophagus. |
| Shortening of lesser curvature is seen. | |
| I exchanged gastrostomy tube today. | |
| This is duodenal Brunner’s gland hyperplasia. | |
| There is also a duodenal ulcer scar at S2 stage. | |
| Extrinsic compression is there in the duodenum. | |
| 19 | This reflux esophagitis is at grade C. |
| A moderate sliding hernia is also seen. | |
| I’ll add SSBE in the report as well. | |
| There is no lesion in the stomach. | |
| Is the lesion in the duodenum a case of GIST? | |
| The neighboring lesion is duodenal Brunner’s gland hyperplasia. | |
| 20 | There is an esophageal granular cell tumor in the middle thoracic esophagus. |
| This patient has previously undergone a gastric ESD. | |
| As previously recognized, DAVE is still present. | |
| This patient has undergone APC therapy before. | |
| Atrophic gastritis is also seen. | |
| There is also periampullary diverticulum in the duodenum. | |
| 21 | Reflux esophagitis, grade A, is seen. |
| This is a mild sliding hernia. | |
| This stomach has undergone distal Gastrectomy with Roux-en-y reconstruction. | |
| Some gastric hyperplastic polyps are seen. | |
| There is an adenoma in the stomach. | |
| There is no abnormal finding in the duodenum. |
Study results regarding ER time.
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| Mean, sec | 116 | 46 | 162 | 130 | 119 | |
| SD, sec | 6 | 13 | 15 | 13 | 10 | |
| Median, sec | 116 | 42 | 161 | 129 | 120 | |
| Range, sec | 105 – 129 | 29 – 82 | 136 – 198 | 113 – 159 | 98 – 135 | |
| Recognition rate | 98.4 % (62/63) | 95.2 % (60/63) | ||||
| No-reaction rate | When inputting findings | 6.3 % (4/63) | 6.3 % (4/63) | |||
| When giving voice commands | 1.6 % (2/126) | |||||
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| Mean, sec | 117 | 104 | 220 | 144 | 128 | |
| SD, sec | 7 | 20 | 24 | 14 | 17 | |
| Median, sec | 116 | 104 | 218 | 141 | 130 | |
| Range, sec | 106 – 133 | 77 – 147 | 189 – 267 | 123 – 168 | 103 – 158 | |
| Recognition rate | 97.6 % (123/126) | 98.4 % (124/126) | ||||
| No-reaction rate | When inputting findings | 0.8 % (1/126) | 6.3 % (8/126) | |||
| When giving voice commands | 4.0 % (10 /252) | |||||
SD, significant deviation.
Fig. 4The comparison of the mean ER time for cases with three findings each.
Fig. 5Comparison of the mean ER time for cases with six findings each.
Performance of the speech recognition system regarding findings.
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| SR | 3 | There is no abnormal finding in the stomach. |
| SR | 6 | There is a gastric telangiectasia. |
| SR | 6 | In the stomach, there are some telangiectasias. |
| SR | 6 | I’ll add SSBE in the report as well. |
| SR + FS | 3 | There is no abnormal finding in the stomach. |
| SR + FS | 3 | The stomach has Mallory-Weiss syndrome, doesn’t it? |
| SR + FS | 3 | For the disease name, this finding is diagnosed as gastric lipoma. |
| SR + FS | 6 | A part of the stomach is narrowing. |
| SR + FS | 6 | This is duodenal Brunner’s gland hyperplasia. |