| Literature DB >> 29868465 |
Amit Jethanandani1,2, Timothy A Lin1,3, Stefania Volpe1,4, Hesham Elhalawani1, Abdallah S R Mohamed1,5,6, Pei Yang1,7, Clifton D Fuller1,6.
Abstract
BACKGROUND: Radiomics has been widely investigated for non-invasive acquisition of quantitative textural information from anatomic structures. While the vast majority of radiomic analysis is performed on images obtained from computed tomography, magnetic resonance imaging (MRI)-based radiomics has generated increased attention. In head and neck cancer (HNC), however, attempts to perform consistent investigations are sparse, and it is unclear whether the resulting textural features can be reproduced. To address this unmet need, we systematically reviewed the quality of existing MRI radiomics research in HNC.Entities:
Keywords: MRI; head and neck; magnetic resonance imaging; radiation oncology; radiomics; texture analysis
Year: 2018 PMID: 29868465 PMCID: PMC5960677 DOI: 10.3389/fonc.2018.00131
Source DB: PubMed Journal: Front Oncol ISSN: 2234-943X Impact factor: 6.244
Figure 1Study methodology and search strategy via Preferred Reporting Items for Systematic Reviews and Meta-Analyses guidelines (35).
Magnetic resonance imaging (MRI) radiomics in HNC: completed studies
| Article title | Article authors | Publication date | Number of patients | Head and neck sub-site | MRI modality and/or sequence used for radiomics analysis | Region of interest (ROI) segmentation method | Image pre-processing: yes/no | Feature extraction software | Analyzed endpoint | Statistical findings: radiomic model performance | Conclusions | Successful search terms used [1 = Radiomic(s), 2 = MRI texture analysis, 3 = texture analysis, 4 = head and neck, 5 = magnetic resonance imaging texture analysis] | Databases [1 = PubMed, 2 = EMBASE, 3 =NIH, 4 = ClinicalTrials.Gov, 5 = Chinese Clinical Trial Registry (ChiCTR)] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Studies on radiomics for segmentation and histopathological classification | |||||||||||||
| MRI texture analysis reflects histopathology parameters in thyroid cancer—a first preliminary study | Meyer HJ, Schob S, Hohn AK, Surov A | 10/6/2017 (electronic publication, ePub); 12/2017 (Print) | 13 | Thyroid | T1-weighted turbo spin echo (TSE); T2-weighted TSE | Not specified | Yes | MaZda | Histopathological classification | 279 texture features were analyzed for univariate association with histological parameters using a Spearman’s correlation coefficient | Several significant correlations were identified between texture features and histopathology | 2 | 1 |
| Multi-institutional validation of a novel textural analysis tool for preoperative stratification of suspected thyroid tumors on diffusion-weighted MRI | Brown AM, Nagala S, McLean Ma, Lu Y, Scoffings D, Apte A, Gonen M, Stambuk HE, Shaha AR, Tuttle RM, Deasy JO, Priest AN, Jani P, Shukla-Dave A, Griffiths J | 5/20/2015 (ePub); 4/2016 (Print) | 42 (training=24, validation=18) | Thyroid | Diffusion-weighted imaging (DWI) | Manual | Yes | MaZda | Histopathological classification | A linear discriminant analysis (LDA) model of the top 21-ranking MaZda textural features classified 89/94 ROIs with 92% sensitivity and 96% specificity [AUC: 0.97, 95% confidence interval (CI): 0.92–1.0]. In a test set of 18 cases, the model’s sensitivity was 89% (95% CI: 65–99%) and its specificity was 97% (95% CI: 74–100%) | Texture analysis is sensitive and specific for stratification of thyroid nodules | 2 | 1 |
| MRI texture analysis predicts p53 status in head and neck squamous cell carcinoma | Dang M, Lysack JT, Wu T, Matthews TW, Chandarana SP, Brockton NT, Bose P, Bansal G, Cheng H, Mitchell JR, Dort JC | 9/25/2014 (ePub); 1/2015 (Print) | 16 | Oropharynx | Contrast-enhanced T1-weighted FSE; T2-weighted fast spin echo (FSE) with fat saturation; DWI | Manual | Yes | 2D Fast Time-Frequency Transform Tool | Histopathological classification | A model of seven significant variables (determined using a subset-size forward selection algorithm and isolation of high-classification percentage variables) correctly classified 81.3% of tumors (κ: 0.625, | A radiomic model containing variables with high classification performance could predict p53 status in oropharyngeal cancer patients | 2 | 1 |
| Texture-based analysis of 100 MR examinations of head and neck tumors—is it possible to discriminate between benign and malignant masses in a multicenter trial? | Fruehwald-Pallamar J, Hesselink JR, Mafee MF, Holzer-Fruehwald L, Czerny C, Mayerhoefer ME | 9/30/2015 (ePub); 2/2016 (Print) | 100 | Head and neck benign (cysts = 8, inflammatory masses = 5, parotid = 9, glomus = 9, vascular malformation = 5, schwannoma = 4, other = 6) and malignant (squamous cell carcinoma = 31, lymphoma = 8, adenoid cystic = 5, adeno = 4, other = 6) tumors | Various | Manual and autosegmentation | No | MaZda | Histopathological classification | LDA models based off subsets of previously-identified, significant texture features demonstrated differences on STIR (61.29–80.65%) and T2-weighted images (T2-TSE: 81.82–100%, T2-TSE with fat suppresion: 71.74–78.26%) for 2D evaluation and on contrast-enhanced T1-TSE with fat saturation (58.54–85.37%) for 3D evaluation. Secondary analysis of subgroups by Tesla strength was also conducted | Texture analysis is not practical for differentiation of tumors using different magnetic resonance (MR) protocols on different MR scanners | 2 | 1 |
| Automated segmentation of the parotid gland based on atlas registration and machine learning: a longitudinal MRI study in head-and-neck radiation therapy | Yang X, Wu N, Cheng G, Zhou Z, Yu DS, Beitler JJ, Curran WJ, Liu T | 10/13/2014 (ePub); 12/2014 (Print) | 15 | Head and neck (oropharynx and larynx but other sites not specified) | Contrast-enhanced T1-weighted; Contrast-enhanced T2-weighted | Manual and autosegmentation | Yes | Not specified | Segmentation accuracy | A three-step autosegmentation method leveraging, as a component, a trained kernel-based support vector machine (SVM) model successfully differentiated 100% of parotid volumes where the average percentage of volume differences between the proposed method and manual physician contours were 7.98% (left parotid) and 8.12% (right parotid). Average Dice volume overlap: 91.1 ± 1.6% (left) and 90.5 ± 2.4% (right). Significant differences in volume reductions were found between 3-month and 1-year follow-up examinations ( | An autosegmentation method leveraging SVM models could accurately segment parotid glands when compared with manual review by trained experts | 2 | 1 |
| Texture-based and diffusion-weighted discrimination of parotid gland lesions on MR images at 3.0 Tesla | Fruehwald-Pallamar J, Czerny C, Holzer-Fruehwald L, Nemec SF, Mueller-Mang C, Weber M, Mayerhoefer ME | 5/23/2013 (ePub); 11/2013 (Print) | 38 | Parotid masses | Contrast-enhanced T1-weighted TSE; T1-weighted TSE; T1-weighted with fat suppression; Short Tau Inversion Recovery (STIR) | Manual and autosegmentation | Yes | MaZda | Histopathological classification | LDA models based off subsets of previously-identified, significant texture features was leveraged to determine differences between benign and malignant parotid masses or pleomorphic adenomas and Warthin tumors on multiple imaging modalities. Contrast-enhanced T1-weighted features correctly classified 81.8–84.5% of benign-malignant masses. Whereas, the same models applied to STIR imaging was poorer in distinguishing benign-malignant masses (73.5–78.4%) and pleomorphic adenomas-Warthin tumors (50–59%) | Contrast-enhanced T1-weighted features contained the most predictive textural information for distinguishing benign and malignant parotid masses. STIR images contained the least relevant textural information | 2 | 1 |
| MRI-based texture analysis to differentiate sinonasal squamous cell carcinoma from inverted papilloma | Ramkumar S, Ranjbar S, Ning S, Lal D, Zwart CM, Wood CP, Weindling SM, Wu T, Mitchell JR, Li J, Hoxworth JM | 3/2/2017 (ePub); 5/2017 (Print) | 46 (training=33, validation=13) | Sinonasal | Contrast-enhanced T1-weighted with fat suppression; T1-weighted; T2-weighted with fat suppression | Manual and autosegmentation | Yes | Python | Histopathological classification | The classification model, developed using five texture algorithms, demonstrated 90.9% accuracy in the training set and 84.6% accuracy in the validation set ( | Machine-learning accuracy of texture analysis algorithms outperformed neuroradiologists’ region of interest (ROI) review in classification of sinonasal carcinomas vs. inverted papillomas; however, its accuracy was not significantly different from neuroradiologists’ review of tumors or entire images | 2 | 1 |
| Studies on radiomics for prognostic and predictive biomarkers | |||||||||||||
| Exploration and validation of radiomics signature as an independent prognostic biomarker in stage III-IVb nasopharyngeal carcinoma | Ouyang FS, Guo B, Zhang B, Dong Y, Zhang L, Mo X, Huang W, Zhang S, Hu Q | 9/26/2017 (ePub); 8/24/2017 (Print) | 100 (training=70, validation=30) | Nasopharynx | Contrast-enhanced T1-weighted; T2-weighted | Manual | Yes | Matlab | PFS (Progression free survival) | In both the discovery and validation sets, a radiomic signature—using features selected via least absolute shrinkage and selection operator (Lasso) regression—successfully stratified patients by PFS risk category (HR: 5.14, | A radiomic signature based off pre-treatment MRI scans could predict PFS risk category and improve clinical decision-making | 1 | 1 |
| Advanced nasopharyngeal carcinoma: pre-treatment prediction of progression based on multi-parametric MRI radiomics | Zhang B, Ouyang FS, Gu D, Dong Y, Zhang L, Mo X, Huang W, Zhang S | 9/22/2017 (ePub); 8/2/2017 (Print) | 113 (training=80, validation=33) | Nasopharynx | Contrast-enhanced T1-weighted; T2-weighted | Manual | No | Matlab | Progression (Dichotomized to Yes and No categories) | Similar to the above strategy, radiomic features were selected using least absolute shrinkage and a Lasso method for significant association with progression. In both the training and validation cohort, the resulting radiomic-based model optimally performed when derived from combined contrast-enhanced T1-weighted and T2-weighted imaging (training: AUC: 0.896, 95% CI: 0.815–0.956; validation: 0.823, 95% CI: 0.645–1.00) | A radiomic model based on contrast-enhanced T1 and T2 features outperformed a model based on either MRI modality alone in its ability to predict progression in advanced nasopharyngeal cancer (NPC) | 1 | 1 |
| Radiomic machine-learning classifiers for prognostic biomarkers of advanced nasopharyngeal carcinoma | Zhang B, He X, Ouyang FS, Gu D, Dong Y, Zhang L, Mo X, Huang W, Tian J, Zhang S | 6/10/2017 (ePub); 9/10/2017 (Print) | 110 (training=70, validation=40) | Nasopharynx | Contrast-enhanced T1-weighted; T2-weighted | Manual | Yes | Matlab | Prognostic performance of predicting local or distant treatment failure | Of the six feature selection and nine classification methods examined, the best predictive model utilized a combination Random Forest method (AUC: 0.8464 ± 0.0069; test error, 0.3135 ± 0.0088) | Radiomics models utilizing random forest methods demonstrated the highest prognostic performance compared with other machine-learning classification schemes, suggesting its utility in enhancing applications of radiomics in precision oncology | 1 | 1 |
| Radiomics features of multi-parametric MRI as novel prognostic factors in advanced nasopharyngeal carcinoma | Zhang B, Tian J, Dong D, Gu D, Dong Y, Zhang L, Lian Z, Liu J, Luo X, Pei S, Mo X, Huang W, Ouyang FS, Guo B, Liang L, Chen W, Liang C, Zhang S | 3/9/2017 (ePub); 8/1/2017 (Print) | 118 (training=88, validation=30) | Nasopharynx | Contrast-enhanced T1-weighted; T2-weighted | Manual | No | Matlab | PFS | Radiomic features were selected using least absolute shrinkage and a Lasso method for PFS nomograms. Radiomic signatures were significantly associated with PFS, with signatures derived from joint contrast-enhanced T1-weighted and T2-weighted images (Training C-index: 0.758, 95% CI: 0.661–0.856; Validation C-index: 0.737, 95% CI: 0.549–0.924). Outperforming signatures from either modality alone. When combined with clinical characteristics, the radiomics signature outperformed clinical characteristics alone in predicting PFS in advanced NPC (C-index, 0.776 vs. 0.649; | Multiparametric MRI-based radiomic nomograms demonstrate prognostic ability in predicting progression in NPC patients | 1 | 1 |
| Texture analysis on parametric maps derived from dynamic contrast-enhanced magnetic resonance imaging in head and neck cancer | Jansen JF, Lu Y, Gupta G, Lee NY, Stambuk HE, Mazaheri Y, Deasy JO, Shukla-Dave A | 1/28/2016 (Print) | 19 | Oropharynx | Dynamic contrast-enhanced (DCE) | Manual | No | Matlab | Treatment response | Texture analysis on parametric DCE-MRI maps revealed energy of ve was higher in intra-treatment vs. pre-treatment scans ( | Pharmokinetic models performed on DCE images, producing ktrans and ve maps, were unable to predict treatment response. However, imaging biomarker E of ve was significantly higher in intra-treatment scans, vs. pre-treatment scans, suggesting a possible change in heterogeneity. The study ultimately conlcudes chemoradiation treatment reduces tumor heterogeneity in this patient cohort | 2 | 1 |
| Use of texture analysis based on contrast-enhanced MRI to predict treatment response to chemoradiotherapy in nasopharyngeal carcinoma | Liu J, Mao Y, Li Z, Zhang D, Zhang Z, Hao S, Li B | 1/18/2016 (ePub); 8/2016 (Print) | 53 (training=42, validation=11) | Nasopharynx | Contrast-enhanced T1-weighted; T2-weighted; DWI; STIR TSE | Manual | Yes | Matlab | Treatment response | Three parameter sets of texture features derived from their respective imaging modalities were iteratively curated using multiple selection (e.g., the dynamic range metric) and classification methods (e.g., LDA). All three (T1: 0.952/0.939, T2: 0.904/0.905, DWI: 0.881/0.929) demonstrated an ability to predict treatment response, with supervised learning models using features from T1-weighted models exhibiting the highest classification performance vs. T2-weighted [artificial neural network (ANN): | Radiomic models exhibit an ability to predict treatment response in NPC patients | 2 | 1 |
| Characterization of cervical lymph-nodes using a multi-parametric and multi-modal approach for an early prediction of tumor response to chemo-radiotherapy | Scalco E, Marzi S, Sanguineti G, Vidiri A, Rizzo G | 9/14/2016 (ePub); 12/2016 (Print) | 30 | Head and neck (sites not specified) | T2-weighted; DWI; computed tomography (CT) | Manual | Yes | Python | Treatment response | Pre-treatment features outperformed mid-chemoradiation features in prediction of treatment response. Absolute diffusion coefficient (ADC) had the highest accuracy but, when combined with texture analysis, classification performance increased (accuracy = 82.8%). When T2-weighted texture features were evaluated independently, their best combination of pre-chemoradiation indices was equivalent in accuracy (81.8%) | An accurate assessment of response to chemoradiation in head and neck cancer patients could potentially be predicted from ADC parameters combined with texture analysis of T2-weighted imaging | 2 | 1 |
| Classification of progression free survival with nasopharyngeal carcinoma tumors | Farhidzadeh H, Kim JY, Scott JG, Goldgof DB, Hall LO, Harrison LB | 3/24/2016 (ePub) | 25 | Nasopharynx | Contrast-enhanced T1-weighted | Manual and autosegmentation | No | Not specified | PFS (dichotomized) | Texture features derived from highly-enhancing signal intensity subregions classified PFS with 80% accuracy (AUC: 0.60). Texture features derived from weakly-enhancing subregions classified PFS with 76% accuracy (AUC: 0.76) | Intratumoral textural variations obtained through radiomics analyses can provide a "novel metric" to predict prognosis and assist clinicians in the design of individualized treatment regimens | 1 | 1 |
| A Magnetic Resonance Imaging-based approach to quantify radiation-induced normal tissue injuries applied to trismus in head and neck cancer | Thor M, Tyagi N, Hatzoglou V, Apte A, Saleh Z, Riaz N, Lee NY, Deasy JO | 3/25/2017 (ePub); 1/2017 (Print) | 20 | Head and neck (sites not specified) | Contrast-enhanced T1-weighted | Manual | No | A Computational Environment for Radiotherapy Research | Radiation-induced trismus | Univariate statistical associations were derived. Mean dose to masseter (M), mean dose to medial pterygoid (MP), and Haralick correlation [gray-level co-occurrence matrix (GLCM)] of MP demonstrated the best discriminative ability in characterizing radiation-induced trismus (AUC: 0.85, 0.77, and 0.78, respectively) | An interplay between dose to M and MP as well as GLCM of MP suggests a possible relationship relevant to the etiology of radiation-induced trismus | 1 | 1 |
Magnetic resonance imaging (MRI) radiomics in HNC: ongoing trials
| Article title | Article authors | Publication date | Number of patients | Head and neck sub-site | MRI modality and/or sequence used for radiomics analysis | ROI segmentation method | Image pre-processing: yes/no | Feature extraction software | Analyzed endpoint | Statistical findings: radiomic model performance or conclusions | Successful search terms used [1 = Radiomic(s), 2 = MRI texture analysis, 3 = texture analysis, 4 = head and neck, 5 = magnetic resonance imaging texture analysis] | Databases (1 = PubMed, 2 = EMBASE, 3 = NIH, 4 = ClinicalTrials.Gov, 5 = ChiCTR) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Big data and models for personalized head and neck cancer decision support (BD2DECIDE) | Poli T, Schcekenback K, Schipper J, Colter L, Licitra L, Gatta G, Favales F, Trama A, De Cecco L, Silini EM, Maglietta G, Caminiti C, Iambin P, Hoebers F, Berlanga A | Estimated study completion date: 4/2019 | Prospective arm: 450, Retrospective: 1000 | Head and neck (Oral cavity, oropharynx, larynx, hypopharynx) | T1-weighted; T2-weighted; Computed Tomography (CT) | Not specified | Not specified | Not specified | Validation of decision support system; secondary outcomes include improved quality of life and assessment of survival time | N/A | 1 | 4 |
| Predictors of normal tissue response from the microenvironment in radiotherapy for prostate and head-and-neck cancer (MICROLEARNER) | Valdagni R, Orlandi E, Bedini N, Cecco LD, Zaffaroni N, Rancati T | Estimated study completion date: 12/31/2019 | Prospective clinical trial population: 130 prostate, 130 HNC; prospective validation population: 70 prostate, 70 HNC | Prostate; Head and neck (oral cavity, pharynx, larynx, paranasal sinuses and nasal cavity, salivary glands) | MRI (not specified) | Not specified | Not specified | Not specified | Acute toxicity <90 days after Rt; secondary outcomes include late toxicity | N/A | 1 | 4 |
| Radiomics features for prediction of effect of local advanced nasopharyngeal carcinoma based on CT or MRI pre-chemoradiotherapy—a prospective cohort study | Su T-S | Estimated study completion date: TBD | Case series of 200 | Nasopharynx | CT or MRI (not specified) | Not specified | Not specified | Not specified | Overall survival (OS), secondary outcomes include local-control rate and progression-free survival (PFS) | N/A | 1 | 5 |
| Personalized postoperative radiochemotherapy in patients with head and neck cancer | Zips DA | Estimated study completion date: 6/2018 | Not specified | Head and neck (oropharynx and hypopharynx) | Positron Emission Tomography (PET), MRI (not specified) | Not specified | Not specified | Not specified | PFS; secondary outcomes—disease free survival, OS, development of a multi-parametric decision support system | N/A | 1 | 4 |